Evidence map›Paper›PMID 27571776›Full record

ArticleNature communications2016

Efficient ex vivo analysis of CD4+ T-cell responses using combinatorial HLA class II tetramer staining.

Hannes Uchtenhagen, Cliff Rims, Gabriele Blahnik, I-Ting Chow, William W Kwok, Jane H Buckner, Eddie A James

Abstract readEvaluation Study
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. CD4Clinical & translational immunology · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. CD4Immunity · 2024
    Article
  11. Epitope-based precision immunotherapy of Type 1 diabetes.Human vaccines & immunotherapeutics · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Characterization of T cell receptors reactive to HCRTProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  17. Review
  18. Preservation of antigen-specific responses in cryopreserved CD4Journal of translational autoimmunity · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hannes UchtenhagenBenaroya Research Institute at Virginia Mason, Translational Research Program, Seattle, Washington 98101, USA.
Cliff RimsBenaroya Research Institute at Virginia Mason, Translational Research Program, Seattle, Washington 98101, USA.
Gabriele BlahnikBenaroya Research Institute at Virginia Mason, Diabetes Program, Seattle, Washington 98101, USA.
I-Ting ChowBenaroya Research Institute at Virginia Mason, Diabetes Program, Seattle, Washington 98101, USA.
William W KwokBenaroya Research Institute at Virginia Mason, Diabetes Program, Seattle, Washington 98101, USA.
Jane H BucknerBenaroya Research Institute at Virginia Mason, Translational Research Program, Seattle, Washington 98101, USA.
Eddie A JamesBenaroya Research Institute at Virginia Mason, Diabetes Program and Tetramer Core Laboratory, Seattle, Washington 98101, USA.

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI Sakeneh Zraika · 1986 to 2026
$41.4M
Evolving Adaptive and Effector Mechanisms from Pre-RA Through Established DiseaseUH2AR067681 · NIAMS · UNIVERSITY OF COLORADO DENVER · PI HOLERS, VERNON MICHAEL · 2014 to 2020
$5.5M
NIAMS NIH HHS UH2 AR067681NIDDK NIH HHS P30 DK017047
6 · The paper itself

Abstract

MHC tetramers are an essential tool for characterizing antigen-specific CD4+ T cells. However, their ex vivo analysis is limited by the large sample requirements. Here we demonstrate a combinatorial staining approach that allows simultaneous characterization of multiple specificities to address this challenge. As proof of principle, we analyse CD4+ T-cell responses to the seasonal influenza vaccine, establishing a frequency hierarchy and examining differences in memory and activation status, lineage commitment and cytokine expression. We also observe cross-reactivity between an established epitope and recent variant and provide a means for probing T-cell receptor cross-reactivity. Using cord blood samples, we correlate the adult frequency hierarchy with the naive precursor frequencies. Last, we use our combinatorial staining approach to demonstrate that rheumatoid arthritis patients on therapy can mount effective responses to influenza vaccination. Together, these results demonstrate the utility of combinatorial tetramer staining and suggest that this approach may have broad applicability in human health and disease.

Indexed as

AdultAgedArthritis, RheumatoidCD4-Positive T-LymphocytesCross ReactionsEpitopes, T-LymphocyteFemaleFetal BloodHLA-DRB1 ChainsHumansInfluenza, HumanInfluenza VaccinesLymphocyte ActivationMaleMiddle AgedProtein MultimerizationEpitopes, T-LymphocyteHLA-DRB1 ChainsInfluenza VaccinesReceptors, Antigen, T-Cell

Identifiers

PMID27571776
PMCPMC5013714

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.