Evidence map›Paper›PMID 27571176›Full record

ArticleNature structural & molecular biology2016

Staphylococcal SCCmec elements encode an active MCM-like helicase and thus may be replicative.

Ignacio Mir-Sanchis, Christina A Roman, Agnieszka Misiura, Ying Z Pigli, Susan Boyle-Vavra, Phoebe A Rice

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
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  3. Microbiology spectrum · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ignacio Mir-SanchisDepartment of Biochemistry and Molecular Biology, The University of Chicago, Chicago, Illinois, USA.
Christina A RomanDepartment of Biochemistry and Molecular Biology, The University of Chicago, Chicago, Illinois, USA.
Agnieszka MisiuraDepartment of Biochemistry and Molecular Biology, The University of Chicago, Chicago, Illinois, USA.
Ying Z PigliDepartment of Biochemistry and Molecular Biology, The University of Chicago, Chicago, Illinois, USA.
Susan Boyle-VavraDepartment of Pediatrics, The University of Chicago, Chicago, Illinois, USA.
Phoebe A RiceDepartment of Biochemistry and Molecular Biology, The University of Chicago, Chicago, Illinois, USA.

Funding

UNIVERSITY OF CHICAGO PREPR25GM066522 · NIGMS · UNIVERSITY OF CHICAGO · PI CARRILLO, ROBERT ARNULFO, RANDALL, GLENN C · 2004 to 2024
$6.7M
Predoctoral Training Program in Chemistry & BiologyT32GM008720 · NIGMS · UNIVERSITY OF CHICAGO · PI PICCIRILLI, JOSEPH ANTHONY · 1999 to 2020
$4.7M
Unexpected parallels between SaPI replication initiators and conserved SCC ORFsR21AI117593 · NIAID · UNIVERSITY OF CHICAGO · PI RICE, PHOEBE A · 2015 to 2016
$435k
NIAID NIH HHS R21 AI117593NIGMS NIH HHS R25 GM066522NIGMS NIH HHS T32 GM008720
6 · The paper itself

Abstract

Methicillin-resistant Staphylococcus aureus (MRSA) is a public-health threat worldwide. Although the mobile genomic island responsible for this phenotype, staphylococcal cassette chromosome (SCC), has been thought to be nonreplicative, we predicted DNA-replication-related functions for some of the conserved proteins encoded by SCC. We show that one of these, Cch, is homologous to the self-loading initiator helicases of an unrelated family of genomic islands, that it is an active 3'-to-5' helicase and that the adjacent ORF encodes a single-stranded DNA-binding protein. Our 2.9-Å crystal structure of intact Cch shows that it forms a hexameric ring. Cch, like the archaeal and eukaryotic MCM-family replicative helicases, belongs to the pre-sensor II insert clade of AAA+ ATPases. Additionally, we found that SCC elements are part of a broader family of mobile elements, all of which encode a replication initiator upstream of their recombinases. Replication after excision would enhance the efficiency of horizontal gene transfer.

Indexed as

Adenosine TriphosphatasesBacterial ProteinsChromosomes, BacterialCrystallography, X-RayDNA, BacterialDNA-Binding ProteinsDNA HelicasesDNA ReplicationHumansMethicillin-Resistant Staphylococcus aureusModels, MolecularOpen Reading FramesProtein ConformationProtein DomainsProtein MultimerizationStaphylococcal InfectionsAdenosine TriphosphatasesBacterial ProteinsDNA, BacterialDNA-Binding ProteinsDNA Helicases

Identifiers

PMID27571176
PMCPMC5052118

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.