Evidence map›Paper›PMID 27570579›Full record

ArticleStandards in genomic sciences2016

First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77.

Ram N Singh, Sonam Gaba, Ajar N Yadav, Prakhar Gaur, Sneha Gulati, Rajeev Kaushik, Anil K Saxena

Open access · goldAbstract readCase Reports
In one paragraph

Article in Standards in genomic sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
12.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 95 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Biodegradation of persistent environmental pollutants by Arthrobacter sp.Environmental science and pollution research international · 2019
    Article
  11. Complete Genome Sequence ofJournal of genomics · 2019
    Article
  12. Whole-Genome Sequences of TwoMicrobiology resource announcements · 2018
    Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ram N SinghDivision of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India.
Sonam GabaDivision of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India.
Ajar N YadavDivision of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India.
Prakhar GaurDivision of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India.
Sneha GulatiDivision of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India.
Rajeev KaushikDivision of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India.
Anil K SaxenaDivision of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India ; Present Address: ICAR-National Bureau of Agriculturally Important Microorganisms, Kushmaur, Mau, 275103 Uttar Pradesh India.
Indian Agricultural Research Institute · INNational Bureau of Agriculturally Important Microorganisms · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arthrobacter agilis strain L77, is a plant growth promoting and cold active hydrolytic enzymes producing psychrotrophic bacterium, isolated from Pangong Lake, a subglacial lake in north western Himalayas, India. Genome analysis revealed metabolic versatility with genes involved in metabolism and cold shock adaptation, utilization and biosynthesis of diverse structural and storage polysaccharides such as plant based carbon polymers. The genome of Arthrobacter agilis strain L77 consists of 3,608,439 bp (3.60 Mb) of a circular chromosome. The genome comprises of 3316 protein coding genes and 74 RNA genes, 725 hypothetical proteins, 25 pseudo-genes and 1404 unique genes.

Indexed as

ArthrobacterCold-active enzymesHimalayasPangong LakePGPBPsychrotrophic

Identifiers

PMID27570579
PMCPMC5000428
OpenAlexW2511393876

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.