Evidence map›Paper›PMID 27570530›Full record

ArticleFrontiers in plant science2016

Involvement of Polyamine Oxidase-Produced Hydrogen Peroxide during Coleorhiza-Limited Germination of Rice Seeds.

Bing-Xian Chen, Wen-Yan Li, Yin-Tao Gao, Zhong-Jian Chen, Wei-Na Zhang, Qin-Jian Liu, Zhuang Chen, Jun Liu

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 47 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Bing-Xian ChenArgo-biological Gene Research Center, Guangdong Academy of Agricultural Sciences Guangzhou, China.
Wen-Yan LiArgo-biological Gene Research Center, Guangdong Academy of Agricultural Sciences Guangzhou, China.
Yin-Tao GaoArgo-biological Gene Research Center, Guangdong Academy of Agricultural Sciences Guangzhou, China.
Zhong-Jian ChenArgo-biological Gene Research Center, Guangdong Academy of Agricultural Sciences Guangzhou, China.
Wei-Na ZhangArgo-biological Gene Research Center, Guangdong Academy of Agricultural Sciences Guangzhou, China.
Qin-Jian LiuArgo-biological Gene Research Center, Guangdong Academy of Agricultural Sciences Guangzhou, China.
Zhuang ChenArgo-biological Gene Research Center, Guangdong Academy of Agricultural Sciences Guangzhou, China.
Jun LiuArgo-biological Gene Research Center, Guangdong Academy of Agricultural Sciences Guangzhou, China.
Guangdong Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Seed germination is a complicated biological process that requires regulated enzymatic and non-enzymatic reactions. The action of polyamine oxidase (PAO) produces hydrogen peroxide (H2O2), which promotes dicot seed germination. However, whether and, if so, how PAOs regulate monocot seed germination via H2O2 production is unclear. Herein, we report that the coleorhiza is the main physical barrier to radicle protrusion during germination of rice seed (a monocot seed) and that it does so in a manner similar to that of dicot seed micropylar endosperm. We found that H2O2 specifically and steadily accumulated in the coleorhizae and radicles of germinating rice seeds and was accompanied by increased PAO activity as the germination percentage increased. These physiological indexes were strongly decreased in number by guazatine, a PAO inhibitor. We also identified 11 PAO homologs (OsPAO1-11) in the rice genome, which could be classified into four subfamilies (I, IIa, IIb, and III). The OsPAO genes in subfamilies I, IIa, and IIb (OsPAO1-7) encode PAOs, whereas those in subfamily III (OsPAO8-11) encode histone lysine-specific demethylases. In silico-characterized expression profiles of OsPAO1-7 and those determined by qPCR revealed that OsPAO5 is markedly upregulated in imbibed seeds compared with dry seeds and that its transcript accumulated to a higher level in embryos than in the endosperm. Moreover, its transcriptional abundance increased gradually during seed germination in water and was inhibited by 5 mM guazatine. Taken together, these results suggest that PAO-generated H2O2 is involved in coleorhiza-limited rice seed germination and that OsPAO5 expression accounts for most PAO expression and activity during rice seed germination. These findings should facilitate further study of PAOs and provide valuable information for functional validation of these proteins during seed germination of monocot cereals.

Indexed as

gene expressionhydrogen peroxidein silico analysisOryza sativaOsPAO5polyamine oxidasesseed germination

Identifiers

PMID27570530
PMCPMC4981591
OpenAlexW2508050896

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.