Evidence map›Paper›PMID 27570307›Full record

ArticleIndian journal of microbiology2016

Isolation of Indole Utilizing Bacteria Arthrobacter sp. and Alcaligenes sp. From Livestock Waste.

Minsu Kim, Jin-Hyung Lee, Eonmi Kim, Hyukjae Choi, Younghoon Kim, Jintae Lee

Abstract read
In one paragraph

Article in Indian journal of microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Biodegradation characteristics and genomic analysis of a newly isolated indole-degrading strain Pseudomonas aeruginosa Jade-X.International microbiology : the official journal of the Spanish Society for Microbiology · 2024
    Article
  4. Article
  5. Identification of an indole biodegradation gene cluster fromFrontiers in bioengineering and biotechnology · 2022
    Article
  6. Biodegradation of persistent environmental pollutants by Arthrobacter sp.Environmental science and pollution research international · 2019
    Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Minsu Kim *School of Chemical Engineering, Yeungnam University, Gyeongsan, 712-749 Republic of Korea.
Jin-Hyung Lee *School of Chemical Engineering, Yeungnam University, Gyeongsan, 712-749 Republic of Korea.
Eonmi KimCollege of Pharmacy, Yeungnam University, Gyeongsan, 712-749 Republic of Korea.
Hyukjae ChoiCollege of Pharmacy, Yeungnam University, Gyeongsan, 712-749 Republic of Korea.
Younghoon KimDepartment of Animal Science and Institute of Milk Genomics, Chonbuk National University, Jeonju, 561-756 Republic of Korea.
Jintae LeeSchool of Chemical Engineering, Yeungnam University, Gyeongsan, 712-749 Republic of Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Indole is an interspecies and interkingdom signaling molecule widespread in different environmental compartment. Although multifaceted roles of indole in different biological systems have been established, little information is available on the microbial utilization of indole in the context of combating odor emissions from different types of waste. The present study was aimed at identifying novel bacteria capable of utilizing indole as the sole carbon and energy source. From the selective enrichment of swine waste and cattle feces, we identified Gram-positive and Gram-negative bacteria belonging to the genera Arthrobacter and Alcaligenes. Bacteria belonging to the genus Alcaligenes showed higher rates of indole utilization than Arthrobacter. Indole at 1.0 mM for growth was completely utilized by Alcaligenes sp. in 16 h. Both strains produced two intermediates, anthranilic acid and isatin, during aerobic indole metabolism. These isolates were also able to grow on several indole derivatives. Interestingly, an adaptive response in terms of a decrease in cell size was observed in both strains in the presence of indole. The present study will help to explain the degradation of indole by different bacteria and also the pathways through which it is catabolized. Furthermore, these novel bacterial isolates could be potentially useful for the in situ attenuation of odorant indole and its derivatives emitted from different types of livestock waste.

Indexed as

Alcaligenes sp.Arthrobacter sp.BiodegradationEnvironmental biotechnologyIndole

Identifiers

PMID27570307
PMCPMC4984429

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.