Evidence map›Paper›PMID 27566758›Full record

ArticleGenome biology and evolution2016

The Transcriptome of the Zoanthid Protopalythoa variabilis (Cnidaria, Anthozoa) Predicts a Basal Repertoire of Toxin-like and Venom-Auxiliary Polypeptides.

Chen Huang, Jean-Étienne Rl Morlighem, Hefeng Zhou, Érica P Lima, Paula B Gomes, Jing Cai, Inchio Lou, Carlos D Pérez, Simon Ming Lee, Gandhi Rádis-Baptista

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
13.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 49 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Chen HuangState Key Laboratory of Quality Research in Chinese Medicine and Institute of Chinese Medical Sciences, University of Macau, Macau, China.
Jean-Étienne Rl MorlighemNortheast Biotechnology Network (RENORBIO), Post-graduation program in Biotechnology, Federal University of Ceará, Fortaleza, Brazil Laboratory of Biochemistry and Biotechnology, Institute for Marine Sciences, Federal University of Ceará, Fortaleza, Brazil.
Hefeng ZhouState Key Laboratory of Quality Research in Chinese Medicine and Institute of Chinese Medical Sciences, University of Macau, Macau, China.
Érica P LimaCentro Acadêmico de Vitoria, Universidade Federal de Pernambuco, Vitória de Santo Antão, Brazil.
Paula B GomesDepartamento de Biologia, Universidade Federal Rural de Pernambuco, Recife, Brazil.
Jing CaiFaculty of Science and Technology, Department of Civil and Environmental Engineering, University of Macau, Macau, China.
Inchio LouFaculty of Science and Technology, Department of Civil and Environmental Engineering, University of Macau, Macau, China.
Carlos D PérezCentro Acadêmico de Vitoria, Universidade Federal de Pernambuco, Vitória de Santo Antão, Brazil gandhi.radis@ufc.br simonlee@umac.mo cdperez@ufpe.br.
Simon Ming LeeState Key Laboratory of Quality Research in Chinese Medicine and Institute of Chinese Medical Sciences, University of Macau, Macau, China gandhi.radis@ufc.br simonlee@umac.mo cdperez@ufpe.br.
Gandhi Rádis-BaptistaLaboratory of Biochemistry and Biotechnology, Institute for Marine Sciences, Federal University of Ceará, Fortaleza, Brazil gandhi.radis@ufc.br simonlee@umac.mo cdperez@ufpe.br.
University of Macau · MOUniversidade Federal de Pernambuco · BRUniversidade Federal do Ceará · BRUniversidade Federal Rural de Pernambuco · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protopalythoa is a zoanthid that, together with thousands of predominantly marine species, such as hydra, jellyfish, and sea anemones, composes the oldest eumetazoan phylum, i.e., the Cnidaria. Some of these species, such as sea wasps and sea anemones, are highly venomous organisms that can produce deadly toxins for preying, for defense or for territorial disputes. Despite the fact that hundreds of organic and polypeptide toxins have been characterized from sea anemones and jellyfish, practically nothing is known about the toxin repertoire in zoanthids. Here, based on a transcriptome analysis of the zoanthid Protopalythoa variabilis, numerous predicted polypeptides with canonical venom protein features are identified. These polypeptides comprise putative proteins from different toxin families: neurotoxic peptides, hemostatic and hemorrhagic toxins, membrane-active (pore-forming) proteins, protease inhibitors, mixed-function venom enzymes, and venom auxiliary proteins. The synthesis and functional analysis of two of these predicted toxin products, one related to the ShK/Aurelin family and the other to a recently discovered anthozoan toxin, displayed potent in vivo neurotoxicity that impaired swimming in larval zebrafish. Altogether, the complex array of venom-related transcripts that are identified in P. variabilis, some of which are first reported in Cnidaria, provides novel insight into the toxin distribution among species and might contribute to the understanding of composition and evolution of venom polypeptides in toxiferous animals.

Indexed as

TranscriptomeAnimalsAnthozoaCnidarian VenomsPeptidesCnidarian VenomsPeptidesHexacoralliamolecular toxinologypeptide toxinRNA-seqtranscriptomevenomicsZoanthidea

Identifiers

PMID27566758
PMCPMC5630949
OpenAlexW2528601009

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.