Evidence map›Paper›PMID 27566661›Full record

ArticleMicrobiology (Reading, England)2016

Identification and characterization of a haem biosynthesis locus in Veillonella.

Peng Zhou, Xiaoli Li, Fengxia Qi

Abstract read
In one paragraph

Article in Microbiology (Reading, England), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 2 pooled it
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 2 syntheses or guidelines pooled it, 42 citations in OpenAlex.

  1. The association between self-reported vaping and the human oral microbiome: a systematic review.Nicotine & tobacco research : official journal of the Society for Research on Nicotine and Tobacco · 2026
    Pooled it
  2. Pooled it
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  14. Review
  15. Periodontal Disease: The Good, The Bad, and The Unknown.Frontiers in cellular and infection microbiology · 2021
    Review
  16. Article
  17. [Research progress in the relationship between Veillonella and oral diseases].Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2020
    Review
  18. Article
  19. Current oral health reports · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Peng ZhouDepartment of Microbiology and Immunology, College of Medicine, University of Oklahoma Health Sciences Center, Oklahoma 73104, USA.
Xiaoli LiDepartment of Microbiology and Immunology, College of Medicine, University of Oklahoma Health Sciences Center, Oklahoma 73104, USA.
Fengxia QiDepartment of Microbiology and Immunology, College of Medicine, University of Oklahoma Health Sciences Center, Oklahoma 73104, USA.
University of Oklahoma Health Sciences Center · US

Funding

Function of adhesins in veillonellae's role as keystone species in biofilm dysbiosisR15DE019940 · NIDCR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI KHAJOTIA, SHARUKH S · 2009 to 2015
$1.0M
Veillonellae:Keystone species in biofilm developmentR21DE024235 · NIDCR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI KHAJOTIA, SHARUKH S · 2014 to 2015
$407k
NIDCR NIH HHS R15 DE019940NIDCR NIH HHS R21 DE024235
6 · The paper itself

Abstract

Haemin/haem is one of the essential nutrients required by periodontopathogens such as Porphyromonas gingivalis to grow in vitro. In the oral cavity, this nutrient is believed to be provided by the crevicular fluid, a serum-like exudate produced during gum inflammation. However, P. gingivalis is also present in the healthy dental biofilm where inflammation is absent. This study was designed to answer the question: what organism(s) in the healthy dental biofilm provides haemin/haem to those periodontal pathogens? We report here that veillonellae, a group of bridging species in dental biofilm development, harbour a complete gene cluster for haem biosynthesis. Haemin production was detected from cell lysate, suggesting that the haem biosynthesis pathway is functional in veillonellae. Using the only transformable strain Veillonella atypica OK5, we inactivated specific key genes in the haem biosynthesis pathway. Inactivation of hemE, encoding the enzyme uroporphyrinogen decarboxylase, not only abolished haemin production but also significantly decreased OK5-supported growth of P. gingivalis. A luciferase gene reporter to the hemEHG operon demonstrated up-regulation of operon expression by P. gingivalis. Analysis of all sequenced genomes of oral bacteria in the HOMD database identified three genera (Veillonella, Propionibacterium and Aggregatibacter) that have a complete haem biosynthesis gene cluster, suggesting that they all could be potential haemin/haem providers in the dental biofilm.

Indexed as

Bacterial ProteinsBiosynthetic PathwaysHemeOperonVeillonellaBacterial ProteinsHeme

Identifiers

PMID27566661
PMCPMC5756479
OpenAlexW2514590885

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.