Evidence map›Paper›PMID 27565642›Full record

ArticleTransgenic research2017

Comparison of effectiveness of 5'-regulatory sequences in transplastomic tobacco chloroplasts.

I M Gerasymenko, Y V Sheludko, A A Klebanovych, V A Rudas, A M Shakhovsky, T M Klein, N V Kuchuk

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Article in Transgenic research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

I M GerasymenkoInstitute of Cell Biology and Genetic Engineering, National Academy of Sciences of Ukraine, Zabolotnoho Str. 148, 03143, Kiev, Ukraine. i-gerasimenko@ukr.net.
Y V SheludkoInstitute of Cell Biology and Genetic Engineering, National Academy of Sciences of Ukraine, Zabolotnoho Str. 148, 03143, Kiev, Ukraine.
A A KlebanovychInstitute of Cell Biology and Genetic Engineering, National Academy of Sciences of Ukraine, Zabolotnoho Str. 148, 03143, Kiev, Ukraine.
V A RudasInstitute of Cell Biology and Genetic Engineering, National Academy of Sciences of Ukraine, Zabolotnoho Str. 148, 03143, Kiev, Ukraine.
A M ShakhovskyInstitute of Cell Biology and Genetic Engineering, National Academy of Sciences of Ukraine, Zabolotnoho Str. 148, 03143, Kiev, Ukraine.
T M KleinDuPont Pioneer AgBiotech, DuPont Experimental Station, Wilmington, DE, USA.
N V KuchukInstitute of Cell Biology and Genetic Engineering, National Academy of Sciences of Ukraine, Zabolotnoho Str. 148, 03143, Kiev, Ukraine.
Institute of Cell Biology · UANational Academy of Sciences of Ukraine · UAPioneer Hi-Bred · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The development of tools which ensure the desired level of transgene expression in plastids is a prerequisite for the effective utilization of these plant organelles for the deployment of bioactive proteins. High-level accumulation of target proteins is considered as a positive feature of transplastomic plants, but excessive accumulation of foreign proteins may have deleterious effects on host plants. On the other hand, expression at low levels can result in ineffective phenotypes. We compared the effectiveness of different 5'-regulatory sequences in driving the expression of a reporter gene, β-glucuronidase (uidA), in tobacco chloroplasts. To achieve varying expression levels, we have chosen heterologous 5'-regulatory sequences which either differ significantly from their homologous counterparts or depend on specific nuclear encoded factors. The Medicago truncatula psbA promoter/5'-UTR supported the highest levels of protein accumulation, surpassing the other tested sequences by two to three orders of magnitude. The heterologous regulatory sequence of Phaseolus vulgaris rbcL gene was as efficient in tobacco chloroplasts as the corresponding homologous promoter/5'-UTR. The Arabidopsis thaliana ndhF promoter/5'-UTR supported as high reporter activity levels as the rbcL 5'-sequences, whereas the effectiveness of A. thaliana psbN promoter/5'-UTR was three fold lower. The characterized regulatory sequences can be utilized to establish transplastomic lines with desirable levels of target protein accumulation. The ability to control transgene expression should be useful for achieving appropriate levels of protein accumulation and thereby avoid their negative impacts on host plant physiology.

Indexed as

Promoter Regions, GeneticArabidopsisChloroplastsGene Expression Regulation, PlantGenes, ReporterGlucuronidaseMedicago truncatulaNADH DehydrogenaseNicotianaPhaseolusPlant ProteinsPlants, Genetically ModifiedPlastidsRibulose-Bisphosphate CarboxylaseGlucuronidaseNADH DehydrogenaseNdhF protein, plantPlant ProteinsRbcL protein, plastidRibulose-Bisphosphate CarboxylaseNicotiana tabacumPlastome 5′-UTRPlastome promotersPlastome transformation

Identifiers

PMID27565642
OpenAlexW2512709960

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.