Evidence map›Paper›PMID 27565427›Full record

ArticleBMC gastroenterology2016

Distribution and clinical significance of hepatitis B virus genotypes in Pakistan.

Majid Mahmood, Muhammad Asim Anwar, Azra Khanum, Nasib Zaman, Abida Raza

Abstract read
In one paragraph

Article in BMC gastroenterology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Hepatitis B Virus: From Diagnosis to Treatment.Polish journal of microbiology · 2020
    Review
  6. Molecular epidemiology of Hepatitis B virus, Hepatitis C virus, and Hepatitis D virus in general population of Afghanistan.The Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology · 2020
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Majid MahmoodDepartment of Zoology, The University of Poonch, Rawalakot, Azad Jammu and Kashmir, 12350, Pakistan. majid1133@gmail.com.ORCID http://orcid.org/0000-0001-6680-3541
Muhammad Asim AnwarDepartment of General Medicine, Pakistan Atomic Energy Commission (PAEC) General Hospital, Islamabad, 44000, Pakistan.
Azra KhanumBarani Institute of Management Sciences (BIMS), Rawalpindi, 46300, Pakistan.
Nasib ZamanCenter for Biotechnology & Microbiology, University of Swat, Swat, 19130, Pakistan.
Abida RazaDiagnostic Department, Nuclear Medicine, Oncology and Radiotherapy Institute (NORI), Islamabad, 44000, Pakistan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHepatitis B virus (HBV) genotype and its role in disease progression and patients' response to antiviral treatment, is not well studied in Pakistan. This comprehensive study was aimed to determine the distribution of HBV genotypes in Pakistan and their possible association with phases of HBV infection.

methodsA total of 840 HBsAg positive samples was collected and tested for HBV DNA quantity. Samples below 100 IU/ml were excluded from the study. A total of 715 samples representing all the six parts of the country were genotyped by type specific primer PCR method. Clinical data of only 384 patients was compared as the remaining 332 were either receiving antiviral treatment or their infection phase was not confirmed.

resultsGenotype D was found in 509 samples (71.2 %), genotype A in 55 samples (7.7 %) and mixed infection with genotypes A and D in 124 samples (17.3 %). Genotypes B, C and E were identified in less than 1 % of the total samples. Genotype A, D and their mixture (A + D) were compared for severity of HBV infection. Significant differences were not found in distribution of HBV genotypes among different disease stages.

conclusionHBV genotype D was the predominant infection in all study areas of Pakistan followed by mixed genotypes infection (A + D) whereas genotype A has 10 times lower prevalence than genotype D. Genotypes B, C, E and F altogether make only 1.5 % of the prevalence. Genotype do not appears to show the severity of liver disease.

Indexed as

GenotypeAdultAntiviral AgentsCoinfectionDNA, ViralFemaleHepatitis B, ChronicHepatitis B Surface AntigensHepatitis B virusHumansMalePakistanPolymerase Chain ReactionPrevalenceAntiviral AgentsDNA, ViralHepatitis B Surface AntigensHBV genotypesHepatitis B virusLiver disease progressionPCR

Identifiers

PMID27565427
PMCPMC5002161

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.