Evidence map›Paper›PMID 27565023›Full record

ArticleDevelopmental biology2016

Shared and distinct mechanisms of atonal regulation in Drosophila ocelli and compound eyes.

Qingxiang Zhou, Dana F DeSantis, Markus Friedrich, Francesca Pignoni

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Patterning of theFrontiers in cell and developmental biology · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Qingxiang ZhouDepartment of Ophthalmology and Center for Vision Research, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Dana F DeSantisDepartment of Ophthalmology and Center for Vision Research, SUNY Upstate Medical University, Syracuse, NY 13210, USA; Department of Neuroscience & Physiology, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Markus FriedrichDepartment of Biological Sciences, Wayne State University, Detroit, MI 48202, USA; Department of Anatomy and Cell Biology, Wayne State University, School of Medicine, Detroit, MI 48201, USA.
Francesca PignoniDepartment of Ophthalmology and Center for Vision Research, SUNY Upstate Medical University, Syracuse, NY 13210, USA; Department of Neuroscience & Physiology, SUNY Upstate Medical University, Syracuse, NY 13210, USA; Department of Biochemistry & Molecular Biology, SUNY Upstate Medical University, Syracuse, NY 13210, USA. Electronic address: PignoniF@upstate.edu.
SUNY Upstate Medical University · USWayne State University · US

Funding

GENETIC CONTROL OF EYE SPECIFICATIONR01EY013167 · NEI · UPSTATE MEDICAL UNIVERSITY · PI PIGNONI, FRANCESCA · 2000 to 2010
$2.9M
Role of Microphthalmia/MITF Factor in Eye DevelopmentR01EY017097 · NEI · UPSTATE MEDICAL UNIVERSITY · PI PIGNONI, FRANCESCA · 2007 to 2011
$1.7M
NEI NIH HHS R01 EY013167NEI NIH HHS R01 EY017097
6 · The paper itself

Abstract

The fruit fly Drosophila melanogaster has two types of external visual organs, a pair of compound eyes and a group of three ocelli. At the time of neurogenesis, the proneural transcription factor Atonal mediates the transition from progenitor cells to differentiating photoreceptor neurons in both organs. In the developing compound eye, atonal (ato) expression is directly induced by transcriptional regulators that confer retinal identity, the Retinal Determination (RD) factors. Little is known, however, about control of ato transcription in the ocelli. Here we show that a 2kb genomic DNA fragment contains distinct and common regulatory elements necessary for ato induction in compound eyes and ocelli. The three binding sites that mediate direct regulation by the RD factors Sine oculis and Eyeless in the compound eye are also required in the ocelli. However, in the latter, these sites mediate control by Sine oculis and the other Pax6 factor of Drosophila, Twin of eyeless, which can bind the Pax6 sites in vitro. Moreover, the three sites are differentially utilized in the ocelli: all three are similarly essential for atonal induction in the posterior ocelli, but show considerable redundancy in the anterior ocellus. Strikingly, this difference parallels the distinct control of ato transcription in the posterior and anterior progenitors of the developing compound eyes. From a comparative perspective, our findings suggest that the ocelli of arthropods may have originated through spatial partitioning from the dorsal edge of an ancestral compound eye.

Indexed as

AnimalsAnimals, Genetically ModifiedBasic Helix-Loop-Helix ProteinsBinding SitesCompound Eye, ArthropodDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsElectrophoretic Mobility Shift AssayEnzyme ActivationEye ProteinsGene Expression Regulation, DevelopmentalHomeodomain ProteinsNerve Tissue ProteinsNeurogenesisPAX6 Transcription Factorato protein, DrosophilaBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsDrosophila ProteinsEye Proteinsey protein, DrosophilaHomeodomain ProteinsNerve Tissue ProteinsPAX6 Transcription FactorSo protein, Drosophilatoy protein, DrosophilaTrans-Activatorsath5atoh7Eye evolutionRDNRetina developmentTranscriptional regulation

Identifiers

PMID27565023
PMCPMC5223745
OpenAlexW2510902877

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.