Evidence map›Paper›PMID 27564309›Full record

ArticleEpigenetics2016

Methylation of SOCS3 is inversely associated with metabolic syndrome in an epigenome-wide association study of obesity.

Omar Ali, Diana Cerjak, Jack W Kent, Roland James, John Blangero, Melanie A Carless, Yi Zhang

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 3 pooled it
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 3 syntheses or guidelines pooled it, 78 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Review
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  9. International journal of molecular sciences · 2024
    Article
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  19. Ten Years of EWAS.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Review
  20. AlteredEpigenetics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Omar Alia Department of Pediatrics , Medical College of Wisconsin , Milwaukee , WI , USA.
Diana Cerjakb TOPS Obesity and Metabolic Research Center, Department of Medicine, Medical College of Wisconsin , Milwaukee , WI , USA.
Jack W Kentd Department of Genetics , Texas Biomedical Research Institute , San Antonio , TX , USA.
Roland Jamesb TOPS Obesity and Metabolic Research Center, Department of Medicine, Medical College of Wisconsin , Milwaukee , WI , USA.
John Blangeroe South Texas Diabetes and Obesity Institute, University of Texas Rio Grande Valley , Brownsville , TX , USA.
Melanie A Carlessd Department of Genetics , Texas Biomedical Research Institute , San Antonio , TX , USA.
Yi Zhangb TOPS Obesity and Metabolic Research Center, Department of Medicine, Medical College of Wisconsin , Milwaukee , WI , USA.
Medical College of Wisconsin · USTexas Biomedical Research Institute · USThe University of Texas Rio Grande Valley · US

Funding

Candidate Genes Affecting Adolescent Metabolic SyndromeR01DK071895 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI SILVERSTEIN, ROY L · 2007 to 2011
$3.0M
Positional Candidate Genes Affecting Metabolic SyndromeR01DK065598 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI KISSEBAH, AHMED HAMED · 2003 to 2007
$2.7M
QUANTITATIVE TRAIT LOCUS MAPPING IN HUMAN PEDIGREESR01MH059490 · NIMH · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI BLANGERO, JOHN · 1998 to 2000
$426k
NICHD NIH HHS HHSN275201100014CNIDDK NIH HHS R01 DK065598NIDDK NIH HHS R01 DK071895NIMH NIH HHS R01 MH059490
6 · The paper itself

Abstract

Epigenetic mechanisms, including DNA methylation, mediate the interaction between gene and environment and may play an important role in the obesity epidemic. We assessed the relationship between DNA methylation and obesity in peripheral blood mononuclear cells (PBMCs) at 485,000 CpG sites across the genome in family members (8-90 y of age) using a discovery cohort (192 individuals) and a validation cohort (1,052 individuals) of Northern European ancestry. After Bonferroni-correction (P

Indexed as

DNA MethylationEpigenesis, GeneticAdolescentAdultAgedAged, 80 and overCase-Control StudiesCell LineChildFemaleGenomeGenome-Wide Association StudyHumansMaleMetabolic SyndromeMiddle AgedSOCS3 protein, humanSuppressor of Cytokine Signaling 3 ProteinBMIchildhood obesityCpG methylationepigeneticsEWASfamily studymetabolic syndromeobesity

Identifiers

PMID27564309
PMCPMC5048720
OpenAlexW2516029638

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.