Evidence map›Paper›PMID 27562597›Full record

ArticleWorld journal of microbiology & biotechnology2016

Aurintricarboxylic acid structure modifications lead to reduction of inhibitory properties against virulence factor YopH and higher cytotoxicity.

Alicja Kuban-Jankowska, Kamlesh K Sahu, Magdalena Gorska, Pawel Niedzialkowski, Jack A Tuszynski, Tadeusz Ossowski, Michal Wozniak

Open access · hybridAbstract read
In one paragraph

Article in World journal of microbiology & biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Alicja Kuban-JankowskaDepartment of Medical Chemistry, Medical University of Gdansk, Gdańsk, Poland. alicjakuban@gumed.edu.pl.
Kamlesh K SahuDepartment of Medical Microbiology and Immunology, University of Alberta, Edmonton, Canada.
Magdalena GorskaDepartment of Medical Chemistry, Medical University of Gdansk, Gdańsk, Poland.
Pawel NiedzialkowskiDepartment of Analytical Chemistry, University of Gdansk, Gdańsk, Poland.
Jack A TuszynskiDepartment of Physics, University of Alberta, Edmonton, Canada.
Tadeusz OssowskiDepartment of Analytical Chemistry, University of Gdansk, Gdańsk, Poland.
Michal WozniakDepartment of Medical Chemistry, Medical University of Gdansk, Gdańsk, Poland.
Gdańsk Medical University · PLUniversity of Alberta · CAUniversity of Gdańsk · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yersinia sp. bacteria owe their viability and pathogenic virulence to the YopH factor, which is a highly active bacterial protein tyrosine phosphatase. Inhibition of YopH phosphatase results in the lack of Yersinia sp. pathogenicity. We have previously described that aurintricarboxylic acid inhibits the activity of YopH at nanomolar concentrations and represents a unique mechanism of YopH inactivation due to a redox process. This work is a continuation of our previous studies. Here we show that modifications of the structure of aurintricarboxylic acid reduce the ability to inactivate YopH and lead to higher cytotoxicity. In the present paper we examine the inhibitory properties of aurintricarboxylic acid analogues, such as eriochrome cyanine R (ECR) and pararosaniline. Computational docking studies we report here indicate that ATA analogues are not precluded to bind in the YopH active site and in all obtained binding conformations ECR and pararosaniline bind to YopH active site. The free binding energy calculations show that ECR has a stronger binding affinity to YopH than pararosaniline, which was confirmed by experimental YopH enzymatic activity studies. We found that ATA analogues can reversibly reduce the enzymatic activity of YopH, but possess weaker inhibitory properties than ATA. The ATA analogues induced inactivation of YopH is probably due to oxidative mechanism, as pretreatment with catalase prevents from inhibition. We also found that ATA analogues significantly decrease the viability of macrophage cells, especially pararosaniline, while ATA reveals only slight effect on cell viability.

Indexed as

AnimalsAurintricarboxylic AcidBacterial Outer Membrane ProteinsBenzenesulfonatesCatalytic DomainCell LineCell SurvivalMiceModels, MolecularMolecular Docking SimulationMolecular Dynamics SimulationMolecular StructureProtein BindingProtein Tyrosine PhosphatasesRosaniline DyesToluidinesAurintricarboxylic AcidBacterial Outer Membrane ProteinsBenzenesulfonatespararosanilineProtein Tyrosine PhosphatasesRosaniline Dyessolochrome cyanine RToluidinesyopH protein, YersiniaAurintricarboxylic acid (ATA)Eriochrome cyanine RPararosanilineProtein tyrosine phosphatases (PTPs)YopH

Identifiers

PMID27562597
PMCPMC4999467
OpenAlexW2507632199

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.