Evidence map›Paper›PMID 27562557›Full record

ArticleToxicological sciences : an official journal of the Society of Toxicology2016

Dose-Dependent Metabolic Reprogramming and Differential Gene Expression in TCDD-Elicited Hepatic Fibrosis.

Rance Nault, Kelly A Fader, Dustin A Ammendolia, Peter Dornbos, Dave Potter, Bonnie Sharratt, Kazuyoshi Kumagai, Jack R Harkema, Sophia Y Lunt, Jason Matthews and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Toxicological sciences : an official journal of the Society of Toxicology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 66 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Application of a metabolic network-based graph neural network for the identification of toxicant-induced perturbations.Toxicological sciences : an official journal of the Society of Toxicology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Hepatic cholesterol biosynthesis and dioxin-induced dysregulation: A multiscale computational approach.Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Cystine/Glutamate XcChemical research in toxicology · 2023
    Article
  16. Article
  17. Article
  18. Cinnabarinic Acid Provides Hepatoprotection Against Nonalcoholic Fatty Liver Disease.The Journal of pharmacology and experimental therapeutics · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Rance NaultBiochemistry & Molecular Biology.
Kelly A FaderBiochemistry & Molecular Biology.
Dustin A AmmendoliaBiochemistry & Molecular Biology.
Peter DornbosBiochemistry & Molecular Biology.
Dave PotterWellington Laboratories, Inc., Guelph, Ontario, Canada.
Bonnie SharrattWellington Laboratories, Inc., Guelph, Ontario, Canada.
Kazuyoshi KumagaiPathology & Diagnostic Investigation, Michigan State University, East Lansing, Michigan.
Jack R HarkemaInstitute for Integrative Toxicology.
Sophia Y LuntBiochemistry & Molecular Biology.
Jason MatthewsDepartment of Nutrition, University of Oslo, Oslo 0316, Norway.
Tim ZacharewskiBiochemistry & Molecular Biology; tzachare@msu.edu.
Michigan State University · USUniversity of Oslo · NO

Funding

MULTIDISCIPLINARY TRAINING IN ENVIRONMENTAL TOXICOLOGYT32ES007255 · NIEHS · MICHIGAN STATE UNIVERSITY · PI JOHN J LAPRES · 1989 to 2026
$9.3M
Integrative Training in the Pharmacological SciencesT32GM092715 · NIGMS · MICHIGAN STATE UNIVERSITY · PI NEUBIG, RICHARD R · 2011 to 2020
$1.5M
CIHRNIEHS NIH HHS T32 ES007255NIGMS NIH HHS T32 GM092715
6 · The paper itself

Abstract

We have previously shown that in response to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD)-elicited NAFLD progression, central carbon, glutaminolysis, and serine/folate metabolism are reprogrammed to support NADPH production and ROS defenses. To further investigate underlying dose-dependent responses associated with TCDD-induced fibrosis, female C57BL/6 mice were gavaged with TCDD every 4 days (d) for 28 d or 92 d. RNA-Seq, ChIP-Seq (2 h), and 28 d metabolomic (urine, serum, and hepatic extract) analyses were conducted with complementary serum marker assessments at 92 d. Additional vehicle and 30 µg/kg treatment groups were allowed to recover for 36 d following the 92-d treatment regimen to examine recovery from TCDD-elicited fibrosis. Histopathology revealed dose-dependent increases in hepatic fat accumulation, inflammation, and periportal collagen deposition at 92 days, with increased fibrotic severity in the recovery group. Serum proinflammatory and profibrotic interleukins-1β, -2, -4, -6, and -10, as well as TNF-α and IFN-γ, exhibited dose-dependent induction. An increase in glucose tolerance was observed with a concomitant 3.0-fold decrease in hepatic glycogen linked to increased ascorbic acid biosynthesis and proline metabolism, consistent with increased fibrosis. RNA-Seq identified differential expression of numerous matrisome genes including an 8.8-fold increase in Tgfb2 indicating myofibroblast activation. Further analysis suggests reprogramming of glycogen, ascorbic acid, and amino acid metabolism in support of collagen deposition and the use of proline as a substrate for ATP production via the proline cycle. In summary, we demonstrate that glycogen, ascorbic acid, and amino acid metabolism are also reorganized to support remodeling of the extracellular matrix, progressing to hepatic fibrosis in response to chronic injury from TCDD.

Indexed as

AnimalsAscorbic AcidCellular ReprogrammingChemical and Drug Induced Liver InjuryCollagenCytokinesDose-Response Relationship, DrugEnergy MetabolismExtracellular MatrixFemaleGene Expression RegulationGlucoseGlycogenInflammation MediatorsLiverLiver CirrhosisAscorbic AcidCollagenCytokinesGlucoseGlycogenInflammation MediatorsPolychlorinated DibenzodioxinsProlineAhR.matrisomemetabolomicNAFLDRNA-Seq

Identifiers

PMID27562557
PMCPMC5139066
OpenAlexW2517487300

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.