Evidence map›Paper›PMID 27562405›Full record

ArticleJournal of applied genetics2017

Beta-amylase gene variability in introgressive wheat lines.

Maksym Antonyuk, Anastasiia Navalikhina, Tamara Ternovska

Open access · greenAbstract read
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In one paragraph

Article in Journal of applied genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 96% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Maksym AntonyukNational University of Kyiv-Mohyla Academy, 2 Skovorody vul., Kyiv, 04655, Ukraine.
Anastasiia NavalikhinaNational University of Kyiv-Mohyla Academy, 2 Skovorody vul., Kyiv, 04655, Ukraine.
Tamara TernovskaNational University of Kyiv-Mohyla Academy, 2 Skovorody vul., Kyiv, 04655, Ukraine. tern@ukma.kiev.ua.
National University of Kyiv Mohyla Academy · UA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Variability of the beta-amylase gene in bread wheat, artificial amphidiploids, and derived introgression wheat lines was analyzed. Variation in homeologous beta-amylase sequences caused by the presence of MITE (Miniature Inverted-Repeat Transposable Element) and its footprint has been identified in bread wheat. The previously unknown location of MITE in Triticum urartu and T. aestivum L. beta-amylase gene has been found. These species have a MITE sequence in the third intron of beta-amylase, as opposed to Aegilops comosa and a number of other Triticeae species, which have it in the fourth intron. These two MITEs from Ae. comosa and T. aestivum were shown to have low identity scores. Miosa, an artificial amphidiploid, which has the M genome from Ae. comosa was shown to lose the MITE sequences. This loss might be caused by genomic shock due to allopolyploidization.

Indexed as

DNA Transposable ElementsGenes, PlantBase Sequencebeta-AmylaseDNA, PlantGenetic VariationIntronsPoaceaeTriticumbeta-AmylaseDNA, PlantDNA Transposable ElementsArtificial amphidiploidsBread wheatGenomic shockMITETransposons

Identifiers

PMID27562405
OpenAlexW2513908134

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.