Evidence map›Paper›PMID 27562378›Full record

ArticleScientific reports2016

Variations in Multiple Syndromic Deafness Genes Mimic Non-syndromic Hearing Loss.

G Bademci, F B Cengiz, J Foster Ii, D Duman, L Sennaroglu, O Diaz-Horta, T Atik, T Kirazli, L Olgun, H Alper and 14 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Review
  3. De Novo HeterozygousInternational journal of molecular sciences · 2025
    Article
  4. Rethinking non-syndromic hearing loss and its mimics in the genomic era.European journal of human genetics : EJHG · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. De novo variants are a common cause of genetic hearing loss.Genetics in medicine : official journal of the American College of Medical Genetics · 2022
    Article
  14. Article
  15. Biallelic KITLG variants lead to a distinct spectrum of hypomelanosis and sensorineural hearing loss.Journal of the European Academy of Dermatology and Venereology : JEADV · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 11 institutions in 3 countries.

G BademciJohn P. Hussman Institute for Human Genomics, University of Miami, Miami, 33136, FL, USA.
F B CengizJohn P. Hussman Institute for Human Genomics, University of Miami, Miami, 33136, FL, USA.
J Foster IiJohn P. Hussman Institute for Human Genomics, University of Miami, Miami, 33136, FL, USA.
D DumanDivision of Genetics, Department of Pediatrics, Ankara University School of Medicine, Ankara, 06620, Turkey.
L SennarogluDepartment of Otolaryngology, Hacettepe University School of Medicine, Ankara, 06100, Turkey.
O Diaz-HortaJohn P. Hussman Institute for Human Genomics, University of Miami, Miami, 33136, FL, USA.
T AtikDivision of Genetics, Department of Pediatrics, Ege University School of Medicine, Izmir, 35040, Turkey.
T KirazliDepartment of Otolaryngology, Ege University School of Medicine, Izmir, 35040, Turkey.
L OlgunDepartment of Otorhinolaryngology, Bozyaka Training and Research Hospital, Bozyaka, Izmir, 35170, Turkey.
H AlperDepartment of Radiology, Ege University School of Medicine, Izmir, 35040, Turkey.
I MenendezJohn P. Hussman Institute for Human Genomics, University of Miami, Miami, 33136, FL, USA.
I LoclarKoc University School of Medicine, Istanbul, 34450, Turkey.
G SennarogluDepartment of Audiology, Hacettepe University Health Sciences Faculty, Ankara, 06100, Turkey.
S Tokgoz-YilmazDepartment of Audiology, Hacettepe University Health Sciences Faculty, Ankara, 06100, Turkey.
S GuoJohn P. Hussman Institute for Human Genomics, University of Miami, Miami, 33136, FL, USA.
Y OlgunDepartment of Otorhinolaryngology, Bozyaka Training and Research Hospital, Bozyaka, Izmir, 35170, Turkey.
N MahdiehRajaie Cardiovascular Medical and Research Center, Iran University of Medical Sciences, Tehran, Iran.
M BonyadiFaculty of Natural Sciences, Center of Excellence for Biodiversity, University of Tabriz, Tabriz, Iran.
N BozanDepartment of Otolaryngology, Faculty of Medicine, Yuzuncu Yıl University, Van, 65080, Turkey.
A AyralDepartment of Otolaryngology, Faculty of Medicine, Yuzuncu Yıl University, Van, 65080, Turkey.
F OzkinayDivision of Genetics, Department of Pediatrics, Ege University School of Medicine, Izmir, 35040, Turkey.
M Yildirim-BaylanDepartment of Otorhinolaryngology, Dicle University School of Medicine, Diyarbakir, 21280, Turkey.
S H BlantonJohn P. Hussman Institute for Human Genomics, University of Miami, Miami, 33136, FL, USA.
M TekinJohn P. Hussman Institute for Human Genomics, University of Miami, Miami, 33136, FL, USA.
University of Miami · USEge University · TRHacettepe University · TRDr. John T. Macdonald Foundation · USIzmir Bozyaka Eğitim ve Araştırma Hastanesi · TRVan Yüzüncü Yıl Üniversitesi · TRAnkara University · TRDicle University · TRIran University of Medical Sciences · IRKoç University · TRUniversity of Tabriz · IR

Funding

A Collaborative Search for New Genes for Non-Syndromic DeafnessR01DC009645 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI MUSTAFA TEKIN · 2010 to 2026
$11.8M
Genetic Studies of Inner Ear AnomaliesR01DC012836 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI TEKIN, MUSTAFA · 2013 to 2017
$3.2M
NIDCD NIH HHS R01 DC009645NIDCD NIH HHS R01 DC012836
6 · The paper itself

Abstract

The genetics of both syndromic (SHL) and non-syndromic hearing loss (NSHL) is characterized by a high degree of genetic heterogeneity. We analyzed whole exome sequencing data of 102 unrelated probands with apparently NSHL without a causative variant in known NSHL genes. We detected five causative variants in different SHL genes (SOX10, MITF, PTPN11, CHD7, and KMT2D) in five (4.9%) probands. Clinical re-evaluation of these probands shows that some of them have subtle syndromic findings, while none of them meets clinical criteria for the diagnosis of the associated syndrome (Waardenburg (SOX10 and MITF), Kallmann (CHD7 and SOX10), Noonan/LEOPARD (PTPN11), CHARGE (CHD7), or Kabuki (KMT2D). This study demonstrates that individuals who are evaluated for NSHL can have pathogenic variants in SHL genes that are not usually considered for etiologic studies.

Indexed as

Genetic Predisposition to DiseaseAdolescentChildChild, PreschoolCohort StudiesConnexinsDeafnessDNA-Binding ProteinsDNA HelicasesExomeFemaleGenetic HeterogeneityGenetic VariationHumansMaleMicrophthalmia-Associated Transcription FactorCHD7 protein, humanConnexinsDNA-Binding ProteinsDNA HelicasesKMT2D protein, humanMicrophthalmia-Associated Transcription FactorMITF protein, humanNeoplasm ProteinsProtein Tyrosine Phosphatase, Non-Receptor Type 11PTPN11 protein, humanSOX10 protein, humanSOXE Transcription Factors

Identifiers

PMID27562378
PMCPMC4999867
OpenAlexW2516841650

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.