Evidence map›Paper›PMID 27561271›Full record

ArticleFamilial cancer2017

Nevoid basal cell carcinoma syndrome caused by splicing mutations in the PTCH1 gene.

Chise Kato, Kentaro Fujii, Yuto Arai, Hiromi Hatsuse, Kazuaki Nagao, Yoshinaga Takayama, Kouzou Kameyama, Katsunori Fujii, Toshiyuki Miyashita

Abstract read
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In one paragraph

Article in Familial cancer, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  8. Fyn and Lyn gene polymorphisms impact the risk of thyroid cancer.Molecular genetics and genomics : MGG · 2022
    Article
  9. A case of skin lesions of basal cell nevus syndrome.Postepy dermatologii i alergologii · 2021
    Article
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Chise KatoDepartment of Molecular Genetics, Kitasato University Graduate School of Medical Sciences, Sagamihara, Japan.
Kentaro FujiiDepartment of Molecular Genetics, Kitasato University School of Medicine, 1-15-1 Kitasato, Minami-ku, Sagamihara, 252-0374, Japan.
Yuto AraiDepartment of Molecular Genetics, Kitasato University Graduate School of Medical Sciences, Sagamihara, Japan.
Hiromi HatsuseDepartment of Molecular Genetics, Kitasato University School of Medicine, 1-15-1 Kitasato, Minami-ku, Sagamihara, 252-0374, Japan.
Kazuaki NagaoDepartment of Molecular Genetics, Kitasato University Graduate School of Medical Sciences, Sagamihara, Japan.
Yoshinaga TakayamaDepartment of Molecular Genetics, Kitasato University Graduate School of Medical Sciences, Sagamihara, Japan.
Kouzou KameyamaDepartment of Molecular Genetics, Kitasato University Graduate School of Medical Sciences, Sagamihara, Japan.
Katsunori FujiiDepartment of Pediatrics, Chiba University Graduate School of Medicine, Chiba, Japan.
Toshiyuki MiyashitaDepartment of Molecular Genetics, Kitasato University Graduate School of Medical Sciences, Sagamihara, Japan. tmiyashi@med.kitasato-u.ac.jp.ORCID 0000-0002-0929-4629
Kitasato University · JPChiba University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nevoid basal cell carcinoma syndrome (NBCCS) is an autosomal dominant disorder characterized by developmental defects and tumorigenesis such as medulloblastomas and basal cell carcinomas, caused by mutations of the patched-1 (PTCH1) gene. To date, we have detected 73 mutations in PTCH1 and ten of them (14 %) were suspected splicing mutations. Eight out of the ten mutations were localized near the splice donor site. Five mutations were localized within the invariant GT-AG splice site, whereas the other five mutations occurred outside the invariant GT-AG site including the last exonic nucleotide. When the transcripts were examined, all mutations resulted in aberrant splicing, including exon skipping or the activation of cryptic splice sites. This is the first extensive report of NBCCS focusing on splice site mutations, and it highlights the importance of analyzing transcripts especially for mutations lying outside the GT-AG splicing consensus site. In addition, the splice site score calculated by Splice-Site Analyzer Tool provided by Tel Aviv University helped predict aberrant splice patterns in most of the cases.

Indexed as

MutationAdolescentAdultBasal Cell Nevus SyndromeChildChild, PreschoolFemaleHumansMaleMiddle AgedPatched-1 ReceptorPedigreeRNA Splice SitesRNA SplicingPatched-1 ReceptorPTCH1 protein, humanRNA Splice SitesNevoid basal cell carcinoma syndromePTCH1Splicing mutation

Identifiers

PMID27561271
OpenAlexW2510416390

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.