Evidence map›Paper›PMID 27560986›Full record

ArticleScientific reports2016

Whole Genome Sequencing Identifies a Missense Mutation in HES7 Associated with Short Tails in Asian Domestic Cats.

Xiao Xu, Xin Sun, Xue-Song Hu, Yan Zhuang, Yue-Chen Liu, Hao Meng, Lin Miao, He Yu, Shu-Jin Luo

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 34 citations in OpenAlex.

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  12. Genes · 2021
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  19. Frontiers in physiology · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Xiao XuPeking-Tsinghua Center for Life Sciences, Laboratory of Genomic Diversity and Evolution, School of Life Sciences, Peking University, Beijing 100871, China.
Xin SunPeking-Tsinghua Center for Life Sciences, Laboratory of Genomic Diversity and Evolution, School of Life Sciences, Peking University, Beijing 100871, China.
Xue-Song HuPeking-Tsinghua Center for Life Sciences, Laboratory of Genomic Diversity and Evolution, School of Life Sciences, Peking University, Beijing 100871, China.
Yan ZhuangPeking-Tsinghua Center for Life Sciences, Laboratory of Genomic Diversity and Evolution, School of Life Sciences, Peking University, Beijing 100871, China.
Yue-Chen LiuPeking-Tsinghua Center for Life Sciences, Laboratory of Genomic Diversity and Evolution, School of Life Sciences, Peking University, Beijing 100871, China.
Hao MengPeking-Tsinghua Center for Life Sciences, Laboratory of Genomic Diversity and Evolution, School of Life Sciences, Peking University, Beijing 100871, China.
Lin MiaoPeking-Tsinghua Center for Life Sciences, Laboratory of Genomic Diversity and Evolution, School of Life Sciences, Peking University, Beijing 100871, China.
He YuPeking-Tsinghua Center for Life Sciences, Laboratory of Genomic Diversity and Evolution, School of Life Sciences, Peking University, Beijing 100871, China.
Shu-Jin LuoPeking-Tsinghua Center for Life Sciences, Laboratory of Genomic Diversity and Evolution, School of Life Sciences, Peking University, Beijing 100871, China.
Peking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Domestic cats exhibit abundant variations in tail morphology and serve as an excellent model to study the development and evolution of vertebrate tails. Cats with shortened and kinked tails were first recorded in the Malayan archipelago by Charles Darwin in 1868 and remain quite common today in Southeast and East Asia. To elucidate the genetic basis of short tails in Asian cats, we built a pedigree of 13 cats segregating at the trait with a founder from southern China and performed linkage mapping based on whole genome sequencing data from the pedigree. The short-tailed trait was mapped to a 5.6 Mb region of Chr E1, within which the substitution c. 5T > C in the somite segmentation-related gene HES7 was identified as the causal mutation resulting in a missense change (p.V2A). Validation in 245 unrelated cats confirmed the correlation between HES7-c. 5T > C and Chinese short-tailed feral cats as well as the Japanese Bobtail breed, indicating a common genetic basis of the two. In addition, some of our sampled kinked-tailed cats could not be explained by either HES7 or the Manx-related T-box, suggesting at least three independent events in the evolution of domestic cats giving rise to short-tailed traits.

Indexed as

Mutation, MissenseAnimalsAnimals, DomesticBasic Helix-Loop-Helix ProteinsCatsChinaChromosome MappingChromosomes, MammalianFemaleMalePedigreePhenotypeTailWhole Genome SequencingBasic Helix-Loop-Helix Proteins

Identifiers

PMID27560986
PMCPMC4997960
OpenAlexW2511958695

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.