Evidence map›Paper›PMID 27560143›Full record

ArticleBiochemistry2016

Crystal Structures of SgcE6 and SgcC, the Two-Component Monooxygenase That Catalyzes Hydroxylation of a Carrier Protein-Tethered Substrate during the Biosynthesis of the Enediyne Antitumor Antibiotic C-1027 in Streptomyces globisporus.

Chin-Yuan Chang, Jeremy R Lohman, Hongnan Cao, Kemin Tan, Jeffrey D Rudolf, Ming Ma, Weijun Xu, Craig A Bingman, Ragothaman M Yennamalli, Lance Bigelow and 5 more

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Elucidating the metabolic pathway and initial degradation gene forApplied and environmental microbiology · 2025
    Article
  3. Article
  4. Review
  5. Article
  6. Catabolism of Alkylphenols inFrontiers in microbiology · 2019
    Article
  7. Monooxygenation of aromatic compounds by flavin-dependent monooxygenases.Protein science : a publication of the Protein Society · 2019
    Review
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Chin-Yuan ChangDepartment of Chemistry, The Scripps Research Institute , Jupiter, Florida 33458, United States.
Jeremy R LohmanDepartment of Chemistry, The Scripps Research Institute , Jupiter, Florida 33458, United States.
Hongnan CaoBioScience at Rice and Department of Chemistry, Rice University , Houston, Texas 77251, United States.
Kemin TanMidwest Center for Structural Genomics and Structural Biology Center, Biosciences Division, Argonne National Laboratory , Argonne, Illinois 60439, United States.
Jeffrey D RudolfDepartment of Chemistry, The Scripps Research Institute , Jupiter, Florida 33458, United States.
Ming MaDepartment of Chemistry, The Scripps Research Institute , Jupiter, Florida 33458, United States.
Weijun XuBioScience at Rice and Department of Chemistry, Rice University , Houston, Texas 77251, United States.
Craig A BingmanDepartment of Biochemistry, University of Wisconsin-Madison , Madison, Wisconsin 53705, United States.
Ragothaman M YennamalliBioScience at Rice and Department of Chemistry, Rice University , Houston, Texas 77251, United States.
Lance BigelowMidwest Center for Structural Genomics and Structural Biology Center, Biosciences Division, Argonne National Laboratory , Argonne, Illinois 60439, United States.
Gyorgy BabniggMidwest Center for Structural Genomics and Structural Biology Center, Biosciences Division, Argonne National Laboratory , Argonne, Illinois 60439, United States.
Xiaohui YanDepartment of Chemistry, The Scripps Research Institute , Jupiter, Florida 33458, United States.
Andrzej JoachimiakMidwest Center for Structural Genomics and Structural Biology Center, Biosciences Division, Argonne National Laboratory , Argonne, Illinois 60439, United States.
George N PhillipsBioScience at Rice and Department of Chemistry, Rice University , Houston, Texas 77251, United States.
Ben ShenDepartment of Chemistry, The Scripps Research Institute , Jupiter, Florida 33458, United States.
Scripps Research Institute · USRice University · USArgonne National Laboratory · USJoint Center for Structural Genomics · USUniversity of Wisconsin–Madison · US

Funding

Enediyne Biosynthesis and EngineeringR01CA078747 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI SHEN, BEN · 1999 to 2015
$3.4M
Enzyme Discovery for Natural Product BiosynthesisU01GM098248 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PHILLIPS, GEORGE NEAL · 2011 to 2015
$2.8M
NCI NIH HHS R01 CA078747NIGMS NIH HHS U01 GM098248
6 · The paper itself

Abstract

C-1027 is a chromoprotein enediyne antitumor antibiotic produced by Streptomyces globisporus. In the last step of biosynthesis of the (S)-3-chloro-5-hydroxy-β-tyrosine moiety of the C-1027 enediyne chromophore, SgcE6 and SgcC compose a two-component monooxygenase that hydroxylates the C-5 position of (S)-3-chloro-β-tyrosine. This two-component monooxygenase is remarkable for two reasons. (i) SgcE6 specifically reacts with FAD and NADH, and (ii) SgcC is active with only the peptidyl carrier protein (PCP)-tethered substrate. To address the molecular details of substrate specificity, we determined the crystal structures of SgcE6 and SgcC at 1.66 and 2.63 Å resolution, respectively. SgcE6 shares a similar β-barrel fold with the class I HpaC-like flavin reductases. A flexible loop near the active site of SgcE6 plays a role in FAD binding, likely by providing sufficient space to accommodate the AMP moiety of FAD, when compared to that of FMN-utilizing homologues. SgcC shows structural similarity to a few other known FADH2-dependent monooxygenases and sheds light on some biochemically but not structurally characterized homologues. The crystal structures reported here provide insights into substrate specificity, and comparison with homologues provides a catalytic mechanism of the two-component, FADH2-dependent monooxygenase (SgcE6 and SgcC) that catalyzes the hydroxylation of a PCP-tethered substrate.

Indexed as

AminoglycosidesAnti-Bacterial AgentsCatalysisCrystallography, X-RayEnediynesHumansHydroxylationSarcoglycansStreptomycesAminoglycosidesAnti-Bacterial AgentsC 1027EnediynesSarcoglycansSGCG protein, human

Identifiers

PMID27560143
PMCPMC5024704
OpenAlexW2513986005

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.