Evidence map›Paper›PMID 27558723›Full record

ArticleBiophysical journal2016

Identification of Bifurcations from Observations of Noisy Biological Oscillators.

Joshua D Salvi, Dáibhid Ó Maoiléidigh, A J Hudspeth

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 38 citations in OpenAlex.

  1. Generative epigenetic landscapes map the topology and topography of cell fates.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. Amplification through local critical behavior in the mammalian cochlea.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Review
  5. The Critical Thing about the Ear's Sensory Hair Cells.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Deletion ofFrontiers in cellular neuroscience · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Effects of Efferent Activity on Hair Bundle Mechanics.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  16. Article
  17. Review
  18. Homeostatic enhancement of sensory transduction.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Joshua D SalviLaboratory of Sensory Neuroscience, The Rockefeller University, New York, New York.
Dáibhid Ó MaoiléidighLaboratory of Sensory Neuroscience, The Rockefeller University, New York, New York.
A J HudspethLaboratory of Sensory Neuroscience, The Rockefeller University, New York, New York; Howard Hughes Medical Institute, The Rockefeller University, New York, New York. Electronic address: hudspaj@rockefeller.edu.
Rockefeller University · US

Funding

Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Investigating the hair-bundle state space in an exploration of inner ear tuningF30DC013468 · NIDCD · WEILL MEDICAL COLL OF CORNELL UNIV · PI SALVI, JOSHUA D · 2013 to 2016
$143k
NIDCD NIH HHS F30 DC013468NIGMS NIH HHS T32 GM007739
6 · The paper itself

Abstract

Hair bundles are biological oscillators that actively transduce mechanical stimuli into electrical signals in the auditory, vestibular, and lateral-line systems of vertebrates. A bundle's function can be explained in part by its operation near a particular type of bifurcation, a qualitative change in behavior. By operating near different varieties of bifurcation, the bundle responds best to disparate classes of stimuli. We show how to determine the identity of and proximity to distinct bifurcations despite the presence of substantial environmental noise. Using an improved mechanical-load clamp to coerce a hair bundle to traverse different bifurcations, we find that a bundle operates within at least two functional regimes. When coupled to a high-stiffness load, a bundle functions near a supercritical Hopf bifurcation, in which case it responds best to sinusoidal stimuli such as those detected by an auditory organ. When the load stiffness is low, a bundle instead resides close to a subcritical Hopf bifurcation and achieves a graded frequency response-a continuous change in the rate, but not the amplitude, of spiking in response to changes in the offset force-a behavior that is useful in a vestibular organ. The mechanical load in vivo might therefore control a hair bundle's responsiveness for effective operation in a particular receptor organ. Our results provide direct experimental evidence for the existence of distinct bifurcations associated with a noisy biological oscillator, and demonstrate a general strategy for bifurcation analysis based on observations of any noisy system.

Indexed as

Biological ClocksAnimalsBiomechanical PhenomenaHair Cells, AuditoryModels, BiologicalRana catesbeianaSignal-To-Noise Ratio

Identifiers

PMID27558723
PMCPMC5002087
OpenAlexW2508413685

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.