Evidence map›Paper›PMID 27558543›Full record

ArticleScientific reports2016

Polycomb-group protein SlMSI1 represses the expression of fruit-ripening genes to prolong shelf life in tomato.

Dan-Dan Liu, Li-Jie Zhou, Mou-Jing Fang, Qing-Long Dong, Xiu-Hong An, Chun-Xiang You, Yu-Jin Hao

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Epigenetics in the modern era of crop improvements.Science China. Life sciences · 2025
    Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Epigenetic regulation in tomato fruit ripening.Frontiers in plant science · 2023
    Review
  8. Exploitation of epigenetic variation of crop wild relatives for crop improvement and agrobiodiversity preservation.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review
  9. Review
  10. Review
  11. Genome-Wide Identification and Analysis of the Polycomb Group Family inInternational journal of molecular sciences · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Dan-Dan LiuNational Key Laboratory of Crop Biology, Shandong Agricultural University, Tai-An, Shandong 271018, China.
Li-Jie ZhouNational Key Laboratory of Crop Biology, Shandong Agricultural University, Tai-An, Shandong 271018, China.
Mou-Jing FangNational Key Laboratory of Crop Biology, Shandong Agricultural University, Tai-An, Shandong 271018, China.
Qing-Long DongNational Key Laboratory of Crop Biology, Shandong Agricultural University, Tai-An, Shandong 271018, China.
Xiu-Hong AnNational Key Laboratory of Crop Biology, Shandong Agricultural University, Tai-An, Shandong 271018, China.
Chun-Xiang YouNational Key Laboratory of Crop Biology, Shandong Agricultural University, Tai-An, Shandong 271018, China.
Yu-Jin HaoNational Key Laboratory of Crop Biology, Shandong Agricultural University, Tai-An, Shandong 271018, China.
Shandong Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polycomb-group (PcG) protein MULTICOPY SUPPRESSOR OF IRA1 (MSI1) protein is an evolutionarily conserved developmental suppressor and plays a crucial role in regulating epigenetic modulations. However, the potential role and function of MSI1 in fleshy fruits remain unknown. In this study, SlMSI1 was cloned and transformed into tomato to explore its function. The quantitative real-time PCR results showed that SlMSI1 was highly expressed in flowers and fruits and that its transcript and protein levels were significantly decreased in fruits after the breaker stage. Additionally, SlMSI1-overexpressing transgenic tomatoes displayed abnormal non-ripening fruit formation, whereas its suppression promoted fruit ripening in transgenic tomatoes. Quantitative real-time PCR assays also showed that RIN and its regulons were decreased in SlMSI1 overexpression transgenic tomato fruits. Furthermore, RNA-seq analysis demonstrated that SlMSI1 inhibits fruit ripening by negatively regulating a large set of fruit-ripening genes in addition to RIN and its regulons. Finally, genetic manipulation of SlMSI1 and RIN successfully prolonged the fruit shelf life by regulating the fruit-ripening genes in tomato. Our findings reveal a novel regulatory function of SlMSI1 in fruit ripening and provide a new regulator that may be useful for genetic engineering and modification of fruit shelf life.

Indexed as

Arabidopsis ProteinsCarrier ProteinsEthylenesFlowersFruitGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantMADS Domain ProteinsNuclear ProteinsPlant ProteinsPlants, Genetically ModifiedPolycomb-Group ProteinsReal-Time Polymerase Chain ReactionSequence Analysis, RNASolanum lycopersicumArabidopsis ProteinsCarrier ProteinsEthylenesMADS Domain ProteinsMSI1 protein, ArabidopsisMSI1 protein, Lycopersicon esculentumNuclear ProteinsPlant ProteinsPolycomb-Group ProteinsTranscription Factors

Identifiers

PMID27558543
PMCPMC4997261
OpenAlexW2507456273

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.