Evidence map›Paper›PMID 27558184›Full record

ArticleJournal of clinical microbiology2016

Accurate Detection of Avian Respiratory Viruses by Use of Multiplex PCR-Based Luminex Suspension Microarray Assay.

Nacira Laamiri, Pia Fällgren, Siamak Zohari, Jaouher Ben Ali, Abdeljelil Ghram, Mikael Leijon, Issam Hmila

Open access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  5. Laboratory tools for the direct detection of bacterial respiratory infections and antimicrobial resistance: a scoping review.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Nacira LaamiriUniversity Tunis El Manar, Laboratory of Epidemiology and Veterinary Microbiology, Pasteur Institute of Tunis, Tunis-Belvedere, Tunisia.
Pia FällgrenDepartment of Microbiology, National Veterinary Institute (SVA), Uppsala, Sweden.
Siamak ZohariDepartment of Microbiology, National Veterinary Institute (SVA), Uppsala, Sweden.
Jaouher Ben AliUniversité de Tunis, ENSIT, LR13ES03 SIME, Montfleury, Tunisia.
Abdeljelil GhramUniversity Tunis El Manar, Laboratory of Epidemiology and Veterinary Microbiology, Pasteur Institute of Tunis, Tunis-Belvedere, Tunisia.
Mikael LeijonDepartment of Microbiology, National Veterinary Institute (SVA), Uppsala, Sweden mikael.leijon@sva.se issam.hmila@pasteur.tn.
Issam HmilaUniversity Tunis El Manar, Laboratory of Epidemiology and Veterinary Microbiology, Pasteur Institute of Tunis, Tunis-Belvedere, Tunisia mikael.leijon@sva.se issam.hmila@pasteur.tn.
Swedish Veterinary Agency · SETunis El Manar University · TNTunis University · TNUniversity of Carthage · TN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel oligonucleotide suspension microarray (Luminex microsphere system) was developed for the rapid detection of avian respiratory viruses of major clinical importance. This test was optimized and validated with 70 clinical samples. The developed tool was accurate for high-throughput detection and differentiation of the most important avian respiratory viruses: avian influenza virus (AIV), Newcastle disease virus (NDV), infection bronchitis virus (IBV), and infectious laryngotracheitis virus (ILTV) in single- and mixed-virus infections. A multiplex reverse transcriptase PCR (RT-PCR), followed by a monoplex or a multiplex Luminex assays, were realized using a Luminex 200 analyzer instrument. The sensitivity, specificity, and reproducibility of the multiplex DNA suspension microarray system were evaluated. The results showed no significant differences in the median fluorescence intensity (MFI) value in monoplex and multiplex Luminex assays. The sensitivity and specificity proved to be completely concordant with monoplex real-time RT-PCR. We demonstrated that the multiplex DNA suspension microarray system is an accurate, high-throughput, and relatively simple method for the rapid detection of the main respiratory viruses of poultry.

Indexed as

AnimalsBird DiseasesBirdsMicroarray AnalysisMultiplex Polymerase Chain ReactionReproducibility of ResultsRespiratory Tract InfectionsReverse Transcriptase Polymerase Chain ReactionSensitivity and SpecificityVirus DiseasesViruses

Identifiers

PMID27558184
PMCPMC5078549
OpenAlexW2537900367

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.