Evidence map›Paper›PMID 27556701›Full record

ArticleOncotarget2016

Somatic mutations in plasma cell-free DNA are diagnostic markers for esophageal squamous cell carcinoma recurrence.

Masami Ueda, Tomohiro Iguchi, Takaaki Masuda, Yujiro Nakahara, Hidenari Hirata, Ryutaro Uchi, Atsushi Niida, Kota Momose, Shotaro Sakimura, Kenichi Chiba and 9 more

Registry-linked trialOpen access · diamondAbstract readEvaluation Study
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03317080 (A Study of the Value of Dynamic Monitoring Circulating Tumor DNA in Patients With Lung Cancer for Post-Operative Evaluation,Therapy Response Assessment,Relapse Prediction and Defining Molecular Phenotypes.), which is not on this map. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03317080 unknown statusnot on this mapstarted 2017, after this paper: background citation

A Study of the Value of Dynamic Monitoring Circulating Tumor DNA in Patients With Lung Cancer for Post-Operative Evaluation,Therapy Response Assessment,Relapse Prediction and Defining Molecular Phenotypes.

TypeobservationalSponsorWest China HospitalRan2017 to 2023Enrolled400ConditionsLung Cancer
3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it, 69 citations in OpenAlex.

  1. Clinical utility and applicability of circulating tumor DNA testing in esophageal cancer: a systematic review and meta-analysis.Diseases of the esophagus : official journal of the International Society for Diseases of the Esophagus · 2022
    Pooled it
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  14. A Review of Circulating Tumor DNA in the Diagnosis and Monitoring of Esophageal Cancer.Medical science monitor : international medical journal of experimental and clinical research · 2022
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  20. International journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 1 country.

Masami UedaDepartment of Surgery, Kyushu University Beppu Hospital, Beppu 874-0838, Japan.
Tomohiro IguchiDepartment of Surgery, Kyushu University Beppu Hospital, Beppu 874-0838, Japan.
Takaaki MasudaDepartment of Surgery, Kyushu University Beppu Hospital, Beppu 874-0838, Japan.
Yujiro NakaharaDepartment of Gastroenterological Surgery, Graduate School of Medicine, Osaka University, Suita 565-0871, Japan.
Hidenari HirataDepartment of Surgery, Kyushu University Beppu Hospital, Beppu 874-0838, Japan.
Ryutaro UchiDepartment of Surgery, Kyushu University Beppu Hospital, Beppu 874-0838, Japan.
Atsushi NiidaLaboratory of DNA Information Analysis, Human Genome Center, Institute of Medical Science, University of Tokyo, Tokyo 108-8639, Japan.
Kota MomoseDepartment of Gastroenterological Surgery, Graduate School of Medicine, Osaka University, Suita 565-0871, Japan.
Shotaro SakimuraDepartment of Surgery, Kyushu University Beppu Hospital, Beppu 874-0838, Japan.
Kenichi ChibaLaboratory of DNA Information Analysis, Human Genome Center, Institute of Medical Science, University of Tokyo, Tokyo 108-8639, Japan.
Hidetoshi EguchiDepartment of Surgery, Kyushu University Beppu Hospital, Beppu 874-0838, Japan.
Shuhei ItoDepartment of Surgery, Kyushu University Beppu Hospital, Beppu 874-0838, Japan.
Keishi SugimachiDepartment of Surgery, Kyushu University Beppu Hospital, Beppu 874-0838, Japan.
Makoto YamasakiDepartment of Gastroenterological Surgery, Graduate School of Medicine, Osaka University, Suita 565-0871, Japan.
Yutaka SuzukiLaboratory of Functional Genomics, Department of Medical Genome Sciences, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa 277-8562, Japan.
Satoru MiyanoLaboratory of DNA Information Analysis, Human Genome Center, Institute of Medical Science, University of Tokyo, Tokyo 108-8639, Japan.
Yuichiro DokiDepartment of Gastroenterological Surgery, Graduate School of Medicine, Osaka University, Suita 565-0871, Japan.
Masaki MoriDepartment of Gastroenterological Surgery, Graduate School of Medicine, Osaka University, Suita 565-0871, Japan.
Koshi MimoriDepartment of Surgery, Kyushu University Beppu Hospital, Beppu 874-0838, Japan.
Kyushu University Beppu Hospital · JPOsaka University · JPTokyo University of Science · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesEsophageal squamous cell carcinoma (ESCC) is one of the most aggressive malignancies owing to the high frequency of tumor recurrence. The identification of markers for early ESCC diagnosis and prediction of recurrence is expected to improve the long-term prognosis. Therefore, we searched for associations between tumor recurrence and cell-free DNA (cfDNA) mutations in blood plasma, which contains genetic markers for various cancer types. EXPERIMENTAL

designGenomic DNA from tumors and cfDNA from plasma were obtained from 13 patients undergoing treatment for newly diagnosed ESCC. Next-generation sequencing of cfDNA in plasma was performed to identify mutations in 53 cancer-related genes, in which recurrent mutations were previously detected in ESCC. cfDNA mutational profiles were compared before and after tumor resection in four patients. Furthermore, somatic mutations in serial plasma samples were monitored after treatment in four patients.

resultsWe identified multiple concordant somatic mutations in cfDNA and primary tumor samples from 10 patients (83.3%) and in cfDNA and metastatic tumor samples from one patient (100%). Furthermore, the allele frequency of the concordant mutations in cfDNA changed concomitantly with tumor burden and increased approximately 6 months earlier than the detection of tumor recurrences by imaging tests in two patients. Conventional biomarkers, such as SCC and p53-Ab, did not reflect tumor recurrences.

conclusionsThe present multigene panel, which enabled the diagnosis of tumor recurrence with greater accuracy than did using standard tumor markers or imaging methods, is expected to greatly facilitate standard, postoperative follow-up monitoring in ESCC.

Indexed as

AgedBiomarkers, TumorCarcinoma, Squamous CellCirculating Tumor DNADNA Mutational AnalysisEsophageal NeoplasmsEsophageal Squamous Cell CarcinomaFemaleHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedMutationNeoplasm Recurrence, LocalPrognosisProspective StudiesBiomarkers, TumorCirculating Tumor DNAcell-free DNAesophageal squamous cell carcinomanext-generation sequencingsomatic mutationtumor recurrence

Identifiers

PMID27556701
PMCPMC5308726
OpenAlexW2517271512

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.