Evidence map›Paper›PMID 27556700›Full record

ArticleOncotarget2016

Identification of breast cancer cell subtypes sensitive to ATG4B inhibition.

Svetlana Bortnik, Courtney Choutka, Hugo M Horlings, Samuel Leung, Jennifer H Baker, Chandra Lebovitz, Wieslawa H Dragowska, Nancy E Go, Marcel B Bally, Andrew I Minchinton and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
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  3. Autophagy Protease ATG4D Facilitates Proliferation and Malignancy of Osteosarcoma Cells.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Svetlana BortnikThe Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, Canada.
Courtney ChoutkaThe Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, Canada.
Hugo M HorlingsDepartment of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada.
Samuel LeungDepartment of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada.
Jennifer H BakerRadiation Biology Unit - Department of Integrative Oncology, BC Cancer Agency, Vancouver, BC, Canada.
Chandra LebovitzThe Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, Canada.
Wieslawa H DragowskaDepartment of Experimental Therapeutics, BC Cancer Agency, Vancouver, BC, Canada.
Nancy E GoThe Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, Canada.
Marcel B BallyDepartment of Experimental Therapeutics, BC Cancer Agency, Vancouver, BC, Canada.
Andrew I MinchintonRadiation Biology Unit - Department of Integrative Oncology, BC Cancer Agency, Vancouver, BC, Canada.
Karen A GelmonMedical Oncology, BC Cancer Agency, Vancouver, BC, Canada.
Sharon M GorskiThe Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, Canada.
BC Cancer Agency · CAUniversity of British Columbia · CASimon Fraser University · CAThe Netherlands Cancer Institute · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy, a lysosome-mediated degradation and recycling process, functions in advanced malignancies to promote cancer cell survival and contribute to cancer progression and drug resistance. While various autophagy inhibition strategies are under investigation for cancer treatment, corresponding patient selection criteria for these autophagy inhibitors need to be developed. Due to its central roles in the autophagy process, the cysteine protease ATG4B is one of the autophagy proteins being pursued as a potential therapeutic target. In this study, we investigated the expression of ATG4B in breast cancer, a heterogeneous disease comprised of several molecular subtypes. We examined a panel of breast cancer cell lines, xenograft tumors, and breast cancer patient specimens for the protein expression of ATG4B, and found a positive association between HER2 and ATG4B protein expression. We showed that HER2-positive cells, but not HER2-negative breast cancer cells, require ATG4B to survive under stress. In HER2-positive cells, cytoprotective autophagy was dependent on ATG4B under both starvation and HER2 inhibition conditions. Combined knockdown of ATG4B and HER2 by siRNA resulted in a significant decrease in cell viability, and the combination of ATG4B knockdown with trastuzumab resulted in a greater reduction in cell viability compared to trastuzumab treatment alone, in both trastuzumab-sensitive and -resistant HER2 overexpressing breast cancer cells. Together these results demonstrate a novel association of ATG4B positive expression with HER2 positive breast cancers and indicate that this subtype is suitable for emerging ATG4B inhibition strategies.

Indexed as

AdultAgedAnimalsAntineoplastic Combined Chemotherapy ProtocolsAutophagyAutophagy-Related ProteinsBreast NeoplasmsCysteine EndopeptidasesDrug Resistance, NeoplasmErb-b2 Receptor Tyrosine KinasesFemaleHeterograftsHumansMiceMiddle AgedTrastuzumabATG4B protein, humanAutophagy-Related ProteinsCysteine EndopeptidasesERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesTrastuzumabATG4Bautophagybreast cancerHER2trastuzumab

Identifiers

PMID27556700
PMCPMC5341851
OpenAlexW2517785578

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.