Evidence map›Paper›PMID 27555495›Full record

ArticleThe journal of histochemistry and cytochemistry : official journal of the Histochemistry Society2016

Comments on Methods to Suppress Endogenous β-Galactosidase Activity in Mouse Tissues Expressing the LacZ Reporter Gene.

Claudia Merkwitz, Orest Blaschuk, Angela Schulz, Albert Markus Ricken

Open access · bronzeAbstract read
In one paragraph

Article in The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Mapping Shroom3 expression across the adult mouse.Gene expression patterns : GEP · 2025
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Expression Pattern of theThe journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Advantages and Limitations of Salmon-Gal/Tetrazolium Salt Histochemistry for the Detection of LacZ Reporter Gene Activity in Murine Epithelial Tissue.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Claudia MerkwitzInstitute of Anatomy ,Faculty of Medicine, University of Leipzig, Leipzig, Germany(CM, AMR)
Orest BlaschukFaculty of Medicine, University of Leipzig, Leipzig, Germany, and Division of Urology, Department of Surgery, McGill University, Montreal, Québec, Canada (OB).
Angela SchulzInstitute of Biochemistry ,Faculty of Medicine, University of Leipzig, Leipzig, Germany(AS)
Albert Markus RickenInstitute of Anatomy ,Faculty of Medicine, University of Leipzig, Leipzig, Germany(CM, AMR)
McGill University · CAIFB Adiposity Diseases · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Escherichia coli LacZ gene (encoding β-galactosidase) is a widely used reporter for gene regulation analysis in transgenic mice. Determination of β-galactosidase activity is classically performed using 5-bromo-4-chloro-3-indolyl-β-d-galactopyranoside/ferri-/ferrocyanide (X-Gal/FeCN) histochemistry. Uncertainty about the origin of the β-galactosidase signal is encountered in tissues containing high levels of endogenous β-galactosidase. Here, we show that reliable results can nevertheless be obtained in these tissues by performing the histochemical reaction under slightly basic pH conditions (pH 8-9). We further demonstrate that in this context, analysis of tissue sections may be advantageous over that of conventional whole-mount tissues because poor dye penetration and remaining tissue acidity are avoided in tissue sections. We also recommend that bacterial debris should always be carefully removed from the luminal surface of gastrointestinal tract specimens unless staining of resident microflora is deliberately used as an internal positive control in the assay. Finally, we show that 6-chloro-3-indolyl-β-d-galactopyranoside with nitrotetrazolium blue chloride works well as an alternative chromogenic substrate for visualizing LacZ reporter gene expression in cryostat sections. Its use in high endogenous β-galactosidase-expressing organs is superior over the use of X-Gal/FeCN at slightly basic pH conditions.

Indexed as

Lac OperonAnimalsbeta-GalactosidaseEmbryo, MammalianEpididymisEscherichia coli ProteinsFerrocyanidesGalactosidesGenes, ReporterHydrogen-Ion ConcentrationIndolesIntestinesKidneyMaleMiceMice, Inbred C57BL5-bromo-4-chloro-3-indolyl beta-galactoside6-chloro-3-indolyl-beta-D-galactopyranosidebeta-GalactosidaseCAC-0982Escherichia coli ProteinsFerrocyanidesGalactosideshexacyanoferrate IIIndoleshistochemistryLacZ reporter geneS-Gal stainingX-Gal stainingβ-galactosidase

Identifiers

PMID27555495
PMCPMC5037502
OpenAlexW2516210301

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.