Evidence map›Paper›PMID 27555323›Full record

ArticleThe Journal of biological chemistry2016

Substrate Affinity Differentially Influences Protein Kinase C Regulation and Inhibitor Potency.

Ruth F Sommese, Sivaraj Sivaramakrishnan

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
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  6. Article
  7. IKBKE inhibits TSC1 to activate the mTOR/S6K pathway for oncogenic transformation.Turkish journal of biology = Turk biyoloji dergisi · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ruth F SommeseFrom the Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, Minnesota 55455.
Sivaraj SivaramakrishnanFrom the Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, Minnesota 55455 sivaraj@umn.edu.
University of Minnesota · US

Funding

The kinase toolbox: Mapping the spatial and temporal regulation of cell signalingDP2CA186752 · NCI · UNIVERSITY OF MINNESOTA · PI SIVARAMAKRISHNAN, SIVARAJ · 2013 to 2013
$2.3M
Probing molecular mechanisms of GPCR functional selectivity in live cellsR01GM105646 · NIGMS · UNIVERSITY OF MINNESOTA · PI SIVARAMAKRISHNAN, SIVARAJ · 2014 to 2017
$1.1M
NCI NIH HHS DP2 CA186752NIGMS NIH HHS R01 GM105646
6 · The paper itself

Abstract

The overlapping network of kinase-substrate interactions provides exquisite specificity in cell signaling pathways, but also presents challenges to our ability to understand the mechanistic basis of biological processes. Efforts to dissect kinase-substrate interactions have been particularly limited by their inherently transient nature. Here, we use a library of FRET sensors to monitor these transient complexes, specifically examining weak interactions between the catalytic domain of protein kinase Cα and 14 substrate peptides. Combining results from this assay platform with those from standard kinase activity assays yields four novel insights into the kinase-substrate interaction. First, preferential binding of non-phosphorylated versus phosphorylated substrates leads to enhanced kinase-specific activity. Second, kinase-specific activity is inversely correlated with substrate binding affinity. Third, high affinity substrates can suppress phosphorylation of their low affinity counterparts. Finally, the substrate-competitive inhibitor bisindolylmaleimide I displaces low affinity substrates more potently leading to substrate selective inhibition of kinase activity. Overall, our approach complements existing structural and biophysical approaches to provide generalizable insights into the regulation of kinase activity.

Indexed as

AnimalsFluorescence Resonance Energy TransferHumansProtein Kinase C-alphaProtein Kinase InhibitorsSf9 CellsSpodopteraSubstrate SpecificityPRKCA protein, humanProtein Kinase C-alphaProtein Kinase Inhibitorsfluorescence resonance energy transfer (FRET)inhibitorphosphorylationprotein kinase C (PKC)substrate specificity

Identifiers

PMID27555323
PMCPMC5063980
OpenAlexW2515924515

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.