Evidence map›Paper›PMID 27555119›Full record

ArticleKidney international2016

Label-free fluorescence lifetime and second harmonic generation imaging microscopy improves quantification of experimental renal fibrosis.

Suman Ranjit, Evgenia Dobrinskikh, John Montford, Alexander Dvornikov, Allison Lehman, David J Orlicky, Raphael Nemenoff, Enrico Gratton, Moshe Levi, Seth Furgeson

Abstract readValidation Study
In one paragraph

Article in Kidney international, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Acute kidney injury results in long-term alterations of kidney lymphatics in mice.American journal of physiology. Renal physiology · 2024
    Article
  5. Article
  6. Review
  7. Article
  8. The TNFThe American journal of pathology · 2023
    Article
  9. Review
  10. Review
  11. Biomedical optics express · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Genes, other than Muc5b, play a role in bleomycin-induced lung fibrosis.American journal of physiology. Lung cellular and molecular physiology · 2021
    Article
  20. Large-scale, three-dimensional tissue cytometry of the human kidney: a complete and accessible pipeline.Laboratory investigation; a journal of technical methods and pathology · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Suman RanjitLaboratory for Fluorescence Dynamics, Department of Biomedical Engineering, University of California, Irvine, California, USA.
Evgenia DobrinskikhDepartment of Medicine, University of Colorado-Anschutz Medical Campus, Aurora, Colorado, USA.
John MontfordDepartment of Medicine, University of Colorado-Anschutz Medical Campus, Aurora, Colorado, USA.
Alexander DvornikovLaboratory for Fluorescence Dynamics, Department of Biomedical Engineering, University of California, Irvine, California, USA.
Allison LehmanDepartment of Medicine, University of Colorado-Anschutz Medical Campus, Aurora, Colorado, USA.
David J OrlickyDepartment of Pathology, University of Colorado-Anschutz Medical Campus, Aurora, Colorado, USA.
Raphael NemenoffDepartment of Medicine, University of Colorado-Anschutz Medical Campus, Aurora, Colorado, USA.
Enrico GrattonLaboratory for Fluorescence Dynamics, Department of Biomedical Engineering, University of California, Irvine, California, USA. Electronic address: egratton@uci.edu.
Moshe LeviDepartment of Medicine, University of Colorado-Anschutz Medical Campus, Aurora, Colorado, USA. Electronic address: moshe.levi@ucdenver.edu.
Seth FurgesonDepartment of Medicine, University of Colorado-Anschutz Medical Campus, Aurora, Colorado, USA.

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Uncover Strategies Used By Biological SystemsP50GM076516 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI NIE, QING · 2007 to 2016
$25.1M
TRD4: Phasor analysisP41GM103540 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI GRATTON, ENRICO · 2012 to 2020
$12.5M
Treatment of Kidney Disease in Diabetes and ObesityR01DK098336 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI LEVI, MOSHE · 2013 to 2016
$1.3M
The role of smooth muscle PPAR gamma in neointima formationK08HL103774 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI FURGESON, SETH BERNAT · 2011 to 2015
$652k
Nephropathy in Obesity and Diabetes: Prevention and TreatmentI01BX001954 · VA · VA EASTERN COLORADO HEALTH CARE SYSTEM · PI LEVI, MOSHE · 2014 to 2017
–
BLRD VA I01 BX001954NCI NIH HHS P30 CA046934NHLBI NIH HHS K08 HL103774NIDDK NIH HHS R01 DK098336NIGMS NIH HHS P41 GM103540NIGMS NIH HHS P50 GM076516
6 · The paper itself

Abstract

All forms of progressive renal diseases develop a final pathway of tubulointerstitial fibrosis and glomerulosclerosis. Renal fibrosis is usually quantified using histological staining, a process that is time-consuming and pathologist dependent. Here we develop a fast and operator-independent method to measure fibrosis utilizing the murine unilateral ureteral obstruction model which manifests a time-dependent fibrotic increase in obstructed kidneys while the contralateral kidneys are used as controls. After ureteral obstruction, kidneys were analyzed at 7, 14, and 21 days. Fibrosis was quantified using fluorescence lifetime imaging (FLIM) and second harmonic generation (SHG) in a Deep Imaging via Enhanced photon Recovery deep tissue imaging microscope. This microscope was developed for deep tissue along with second and third harmonic generation imaging and has extraordinary sensitivity toward harmonic generation. SHG data suggest the presence of more fibrillar collagen in the obstructed kidneys. The combination of short-wavelength FLIM and SHG analysis results in a robust assessment procedure independent of observer interpretation and let us create criteria to quantify the extent of fibrosis directly from the image. Thus, the FLIM-SHG technique shows remarkable improvement in quantification of renal fibrosis compared to standard histological techniques.

Indexed as

Microscopy, FluorescenceOptical ImagingAnimalsDisease Models, AnimalFibrosisKidneyMiceNephrosclerosisautofluorescencecollagenfibrosisFLIMSHGUUO

Identifiers

PMID27555119
PMCPMC5473685

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.