Evidence map›Paper›PMID 27553239›Full record

ArticleAdvances in experimental medicine and biology2016

Applications of the BLEND Software to Crystallographic Data from Membrane Proteins.

Pierre Aller, Tian Geng, Gwyndaf Evans, James Foadi

Erratum issuedAbstract read
In one paragraph

Article in Advances in experimental medicine and biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Versatile microporous polymer-based supports for serial macromolecular crystallography.Acta crystallographica. Section D, Structural biology · 2021
    Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Pierre AllerDiamond Light Source Ltd, Harwell Science and Innovation Campus, OX11 0DE, Didcot, UK.
Tian GengMembrane Protein Laboratory, Diamond Light Source Ltd, Harwell Science and Innovation Campus, OX11 0DE, Didcot, UK.
Gwyndaf EvansDiamond Light Source Ltd, Harwell Science and Innovation Campus, OX11 0DE, Didcot, UK.
James FoadiDiamond Light Source Ltd, Harwell Science and Innovation Campus, OX11 0DE, Didcot, UK. james.foadi@diamond.ac.uk.

Funding

Wellcome Trust
6 · The paper itself

Abstract

X-ray diffraction from crystals of membrane proteins very often yields incomplete datasets due to, among other things, severe radiation damage. Multiple crystals are thus required to form complete datasets, provided the crystals themselves are isomorphous. Selection and combination of data from multiple crystals is a difficult and tedious task that can be facilitated by purpose-built software. BLEND, in the CCP4 suite of programs for macromolecular crystallography (MX), has been created exactly for this reason. In this chapter the program is described and its workings illustrated by means of data from two membrane proteins.

Indexed as

Crystallography, X-RaySoftwareBacterial ProteinsComputer GraphicsHaemophilus influenzaeHumansMathematical ComputingMembrane ProteinsReceptors, Histamine H1Bacterial ProteinsMembrane ProteinsReceptors, Histamine H1BlendCluster analysisData mergingData scalingIsomorphismMembrane proteinsMultiple crystalsRadiation damage

Identifiers

PMID27553239
PMCPMC6126465

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.