ArticleThe ISME journal2017
Global occurrence and heterogeneity of the Roseobacter-clade species Ruegeria mobilis.
Article in The ISME journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 47 papers.
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Who cites it
47 citing papers in PubMed.
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- Social organization and habitat use shape the gut microbiome of a marine fish.The Journal of animal ecology · 2026Article
- Lifestyle-dependent evolution and CtrA-mediated lifestyle transitions shape phage resistance in marine Roseobacter.Nature communications · 2026Article
- Where Have You Been? Backtracking Microplastic to Its Source Using the Biomolecular Composition of the Ecocorona.Environmental science & technology · 2025Article
- Characterizing Gut Microbiota Composition and Its Correlation with Growth Variation in Sea Cucumber Apostichopus japonicus.Marine biotechnology (New York, N.Y.) · 2025Article
- Microbiome determinants of productivity in aquaculture of whiteleg shrimp.Applied and environmental microbiology · 2025Article
- Bacterial Infection Disrupts the Intestinal Bacterial Community and Facilitates the Enrichment of Pathogenic Bacteria in the Intestines ofMicroorganisms · 2025Article
- Beneficial effects of probiotics onZoological research · 2025Article
- Respiratory microbiomes reflect whale health.The ISME journal · 2025Article
- Autecology of an oscillating population of a novel host-associatedISME communications · 2025Article
- Analysis of Gut Microbiota Associated with WSSV Resistance in Litopenaeus vannamei.Marine biotechnology (New York, N.Y.) · 2024Article
- Rhodobacteraceae are Prevalent and Ecologically Crucial Bacterial Members in Marine Biofloc Aquaculture.Journal of microbiology (Seoul, Korea) · 2024Article
- Genome-centric metagenomics provides insights into the core microbial community and functional profiles of biofloc aquaculture.mSystems · 2024Article
- Acute Ammonia Causes Pathogenic Dysbiosis of Shrimp Gut Biofilms.International journal of molecular sciences · 2024Article
- A Comparative Study on Effects of Three Butyric Acid-Producing Additives on the Growth Performance, Non-specific Immunity, and Intestinal Microbiota of the Sea CucumberAquaculture nutrition · 2024Article
- Copiotrophy in a Marine-Biofilm-Derived Roseobacteraceae Bacterium Can Be Supported by Amino Acid Metabolism and Thiosulfate Oxidation.International journal of molecular sciences · 2023Article
- Mutation-induced infections of phage-plasmids.Nature communications · 2023Article
- Anaerobic thiosulfate oxidation by the Roseobacter group is prevalent in marine biofilms.Nature communications · 2023Article
- The potential to produce tropodithietic acid by Phaeobacter inhibens affects the assembly of microbial biofilm communities in natural seawater.NPJ biofilms and microbiomes · 2023Article
- Storage and Algal Association of Bacteria That ProtectMicroorganisms · 2023Article
Corrections and comments
- Erratum issued
Authors and funding
12 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Tropodithietic acid (TDA)-producing Ruegeria mobilis strains of the Roseobacter clade have primarily been isolated from marine aquaculture and have probiotic potential due to inhibition of fish pathogens. We hypothesized that TDA producers with additional novel features are present in the oceanic environment. We isolated 42 TDA-producing R. mobilis strains during a global marine research cruise. While highly similar on the 16S ribosomal RNA gene level (99-100% identity), the strains separated into four sub-clusters in a multilocus sequence analysis. They were further differentiated to the strain level by average nucleotide identity using pairwise genome comparison. The four sub-clusters could not be associated with a specific environmental niche, however, correlated with the pattern of sub-typing using co-isolated phages, the number of prophages in the genomes and the distribution in ocean provinces. Major genomic differences within the sub-clusters include prophages and toxin-antitoxin systems. In general, the genome of R. mobilis revealed adaptation to a particle-associated life style and querying TARA ocean data confirmed that R. mobilis is more abundant in the particle-associated fraction than in the free-living fraction occurring in 40% and 6% of the samples, respectively. Our data and the TARA data, although lacking sufficient data from the polar regions, demonstrate that R. mobilis is a globally distributed marine bacterial species found primarily in the upper open oceans. It has preserved key phenotypic behaviors such as the production of TDA, but contains diverse sub-clusters, which could provide new capabilities for utilization in aquaculture.
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