Evidence map›Paper›PMID 27550514›Full record

ArticleNature communications2016

A MUB E2 structure reveals E1 selectivity between cognate ubiquitin E2s in eukaryotes.

Xiaolong Lu, Konstantin R Malley, Caitlin C Brenner, Olga Koroleva, Sergey Korolev, Brian P Downes

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  4. Review
  5. The Structure of theFrontiers in cell and developmental biology · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Xiaolong LuDepartment of Biology, Saint Louis University, 3507 Laclede Avenue, St Louis, MO 63103, USA.
Konstantin R MalleyDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, 1100 S, Grand Avenue, St Louis, MO 63104, USA.
Caitlin C BrennerDepartment of Biology, Saint Louis University, 3507 Laclede Avenue, St Louis, MO 63103, USA.
Olga KorolevaDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, 1100 S, Grand Avenue, St Louis, MO 63104, USA.
Sergey KorolevDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, 1100 S, Grand Avenue, St Louis, MO 63104, USA.
Brian P DownesDepartment of Biology, Saint Louis University, 3507 Laclede Avenue, St Louis, MO 63103, USA.
Saint Louis University · US

Funding

Functional Characterization of Membrane-Anchored Ubiquitin-Fold Protein ComplexesR15GM096279 · NIGMS · SAINT LOUIS UNIVERSITY · PI DOWNES, BRIAN PATRICK · 2011 to 2011
$285k
NIGMS NIH HHS R15 GM096279
6 · The paper itself

Abstract

Ubiquitin (Ub) is a protein modifier that controls processes ranging from protein degradation to endocytosis, but early-acting regulators of the three-enzyme ubiquitylation cascade are unknown. Here we report that the prenylated membrane-anchored ubiquitin-fold protein (MUB) is an early-acting regulator of subfamily-specific E2 activation. An AtMUB3:AtUBC8 co-crystal structure defines how MUBs inhibit E2∼Ub formation using a combination of E2 backside binding and a MUB-unique lap-bar loop to block E1 access. Since MUBs tether Arabidopsis group VI E2 enzymes (related to HsUbe2D and ScUbc4/5) to the plasma membrane, and inhibit E2 activation at physiological concentrations, they should function as potent plasma membrane localized regulators of Ub chain synthesis in eukaryotes. Our findings define a biochemical function for MUB, a family of highly conserved Ub-fold proteins, and provide an example of selective activation between cognate Ub E2s, previously thought to be constitutively activated by E1s.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsCell MembraneCrystallography, X-RayEukaryotaMembrane ProteinsModels, MolecularProtein BindingProtein DomainsProtein PrenylationSequence Homology, Amino AcidUbiquitinationUbiquitin-Conjugating EnzymesArabidopsis ProteinsMembrane ProteinsUbiquitin-Conjugating Enzymes

Identifiers

PMID27550514
PMCPMC4996978
OpenAlexW2512635443

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.