Evidence map›Paper›PMID 27549312›Full record

ArticleCell communication and signaling : CCS2016

A new mode of SAM domain mediated oligomerization observed in the CASKIN2 neuronal scaffolding protein.

Ekaterina Smirnova, Jamie J Kwan, Ryan Siu, Xin Gao, Georg Zoidl, Borries Demeler, Vivian Saridakis, Logan W Donaldson

Open access · goldAbstract read
In one paragraph

Article in Cell communication and signaling : CCS, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. CASKIN2 mediates PTPσ-orchestrated transsynaptic mechanisms at excitatory synapses.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Ekaterina SmirnovaDepartment of Biology, York University, 4700 Keele Street, Toronto, ON, M3J 1P3, Canada.
Jamie J KwanDepartment of Biology, York University, 4700 Keele Street, Toronto, ON, M3J 1P3, Canada.
Ryan SiuDepartment of Biology, York University, 4700 Keele Street, Toronto, ON, M3J 1P3, Canada.
Xin GaoDivision of Computer, Computational Bioscience Research Center, Electrical and Mathematical Science and Engineering, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Kingdom of Saudi Arabia.
Georg ZoidlDepartment of Biology, York University, 4700 Keele Street, Toronto, ON, M3J 1P3, Canada.
Borries DemelerDepartment of Biochemistry, University of Texas Health Science Center at San Antonio, 7760 Floyd Curl Drive, San Antonio, TX, 78229-3900, USA.
Vivian SaridakisDepartment of Biology, York University, 4700 Keele Street, Toronto, ON, M3J 1P3, Canada.
Logan W DonaldsonDepartment of Biology, York University, 4700 Keele Street, Toronto, ON, M3J 1P3, Canada. logand@yorku.ca.
York University · CAKing Abdullah University of Science and Technology · SAThe University of Texas Health Science Center at San Antonio · US

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
Development of an UltraScan Meta-Scheduler for HPC Job SubmissionR01GM120600 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Emre H. Brookes, BORRIES DEMELER · 2016 to 2026
$3.6M
NCI NIH HHS P30 CA054174
6 · The paper itself

Abstract

backgroundCASKIN2 is a homolog of CASKIN1, a scaffolding protein that participates in a signaling network with CASK (calcium/calmodulin-dependent serine kinase). Despite a high level of homology between CASKIN2 and CASKIN1, CASKIN2 cannot bind CASK due to the absence of a CASK Interaction Domain and consequently, may have evolved undiscovered structural and functional distinctions.

resultsWe demonstrate that the crystal structure of the Sterile Alpha Motif (SAM) domain tandem (SAM1-SAM2) oligomer from CASKIN2 is different than CASKIN1, with the minimal repeating unit being a dimer, rather than a monomer. Analytical ultracentrifugation sedimentation velocity methods revealed differences in monomer/dimer equilibria across a range of concentrations and ionic strengths for the wild type CASKIN2 SAM tandem and a structure-directed double mutant that could not oligomerize. Further distinguishing CASKIN2 from CASKIN1, EGFP-tagged SAM tandem proteins expressed in Neuro2a cells produced punctae that were distinct both in shape and size.

conclusionsThis study illustrates a new way in which neuronal SAM domains can assemble into large macromolecular assemblies that might concentrate and amplify synaptic responses.

Indexed as

Protein MultimerizationAdaptor Proteins, Signal TransducingHumansMolecular Dynamics SimulationNerve Tissue ProteinsProtein DomainsAdaptor Proteins, Signal TransducingCASKIN2 protein, humanNerve Tissue ProteinsAnalytical ultracentrifugationCell signalingCrystal structureNeuroscienceNuclear magnetic resonanceProtein structureScaffold protein

Identifiers

PMID27549312
PMCPMC4994250
OpenAlexW2518651533

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.