Evidence map›Paper›PMID 27548675›Full record

ArticlePloS one2016

The Gene Encoding Dihydroflavonol 4-Reductase Is a Candidate for the anthocyaninless Locus of Rapid Cycling Brassica rapa (Fast Plants Type).

Douglas L Wendell, Anoumid Vaziri, Gurbaksh Shergill

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 94% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Functional Analysis of GenesBioMed research international · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Douglas L WendellDepartment of Biological Sciences, Oakland University, Rochester, Michigan, United States of America.
Anoumid VaziriDepartment of Biological Sciences, Oakland University, Rochester, Michigan, United States of America.
Gurbaksh ShergillDepartment of Biological Sciences, Oakland University, Rochester, Michigan, United States of America.
Oakland University · USMichigan United · US

Funding

DNA Markers for Fast Plants to Teach Scientific ThinkingRC1RR030293 · NCRR · OAKLAND UNIVERSITY · PI PICKARD, DAWN M, WENDELL, DOUGLAS L · 2009 to 2010
$265k
NCRR NIH HHS RC1 RR030293
6 · The paper itself

Abstract

Rapid cycling Brassica rapa, also known as Wisconsin Fast Plants, are a widely used organism in both K-12 and college science education. They are an excellent system for genetics laboratory instruction because it is very easy to conduct genetic crosses with this organism, there are numerous seed stocks with variation in both Mendelian and quantitative traits, they have a short generation time, and there is a wealth of educational materials for instructors using them. Their main deficiency for genetics education is that none of the genetic variation in RCBr has yet been characterized at the molecular level. Here we present the first molecular characterization of a gene responsible for a trait in Fast Plants. The trait under study is purple/nonpurple variation due to the anthocyaninless locus, which is one of the Mendelian traits most frequently used for genetics education with this organism. We present evidence that the DFR gene, which encodes dihyroflavonol 4-reductase, is the candidate gene for the anthocyaninless (ANL) locus in RCBr. DFR shows complete linkage with ANL in genetic crosses with a total of 948 informative chromosomes, and strains with the recessive nonpurple phenotype have a transposon-related insertion in the DFR which is predicted to disrupt gene function.

Indexed as

Quantitative Trait LociAlcohol OxidoreductasesBase SequenceBrassica rapaChromosome MappingChromosomes, PlantCloning, MolecularDNA Transposable ElementsEscherichia coliGene ExpressionGenetic LinkageGenotypeHomeodomain ProteinsMutagenesis, InsertionalPhenotypePlant BreedingAlcohol Oxidoreductasesdihydroflavanol 4-reductaseDNA Transposable ElementsHomeodomain ProteinsPlant ProteinsRecombinant Proteins

Identifiers

PMID27548675
PMCPMC4993499
OpenAlexW2509612494

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.