Evidence map›Paper›PMID 27548313›Full record

ArticleNature genetics2016

Transcription factors mediate condensin recruitment and global chromosomal organization in fission yeast.

Kyoung-Dong Kim, Hideki Tanizawa, Osamu Iwasaki, Ken-Ichi Noma

Abstract read
In one paragraph

Article in Nature genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
  2. Unique Role of Med8 in Ace2 Recruitment and Target Gene Expression inJournal of microbiology and biotechnology · 2025
    Article
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  6. Review
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  9. Viral remodeling of the 4D nucleome.Experimental & molecular medicine · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kyoung-Dong KimThe Wistar Institute, Philadelphia, Pennsylvania, USA.
Hideki TanizawaThe Wistar Institute, Philadelphia, Pennsylvania, USA.
Osamu IwasakiThe Wistar Institute, Philadelphia, Pennsylvania, USA.
Ken-Ichi NomaThe Wistar Institute, Philadelphia, Pennsylvania, USA.
The Wistar Institute · US

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Alessandro Gardini · 1985 to 2026
$75.9M
A New Methodology to Decipher Three-Dimensional Genome StructureDP2OD004348 · OD · WISTAR INSTITUTE · PI NOMA, KENICHI · 2008 to 2008
$3.1M
Condensin connects 3D genome organization, chromosomal segregation, andgene regulation via its interactions with transcription-related factors.R01GM124195 · NIGMS · WISTAR INSTITUTE · PI NOMA, KENICHI · 2017 to 2020
$1.8M
NCI NIH HHS P30 CA010815NIGMS NIH HHS R01 GM124195NIH HHS DP2 OD004348
6 · The paper itself

Abstract

It is becoming clear that structural-maintenance-of-chromosomes (SMC) complexes such as condensin and cohesin are involved in three-dimensional genome organization, yet their exact roles in functional organization remain unclear. We used chromatin interaction analysis by paired-end tag sequencing (ChIA-PET) to comprehensively identify genome-wide associations mediated by condensin and cohesin in fission yeast. We found that although cohesin and condensin often bind to the same loci, they direct different association networks and generate small and larger chromatin domains, respectively. Cohesin mediates associations between loci positioned within 100 kb of each other; condensin can drive longer-range associations. Moreover, condensin, but not cohesin, connects cell cycle-regulated genes bound by mitotic transcription factors. This study describes the different functions of condensin and cohesin in genome organization and how specific transcription factors function in condensin loading, cell cycle-dependent genome organization and mitotic chromosome organization to support faithful chromosome segregation.

Indexed as

Chromosomes, FungalAdenosine TriphosphatasesBinding SitesCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsGATA Transcription FactorsGenes, cdcGenes, FungalMitosisMultiprotein ComplexesNuclear ProteinsPhosphoproteinsProtein DomainsAce2 protein, S pombeAdenosine TriphosphatasesAms2 protein, S pombeCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinscondensin complexescut14 protein, S pombeDNA-Binding ProteinsGATA Transcription FactorsMultiprotein ComplexesNuclear ProteinsPhosphoproteinsRad21 protein, S pombeSchizosaccharomyces pombe ProteinsTranscription Factors

Identifiers

PMID27548313
PMCPMC5042855
OpenAlexW2507358820

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.