Evidence map›Paper›PMID 27547186›Full record

ArticleFrontiers in pharmacology2016

Genetic Polymorphisms Associated to Folate Transport as Predictors of Increased Risk for Acute Lymphoblastic Leukemia in Mexican Children.

Fausto Zaruma-Torres, Ismael Lares-Asseff, Aurea Lima, Aarón Reyes-Espinoza, Verónica Loera-Castañeda, Martha Sosa-Macías, Carlos Galaviz-Hernández, María C Arias-Peláez, Miguel A Reyes-López, Luis A Quiñones

Open access · goldAbstract read
In one paragraph

Article in Frontiers in pharmacology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Genotype Analysis ofFrontiers in pharmacology · 2020
    Article
  3. Article
  4. State of Art of Cancer Pharmacogenomics in Latin American Populations.International journal of molecular sciences · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Fausto Zaruma-TorresPharmacogenomics Academia, National Polytechnic Institute-CIIDIRDurango, Mexico; School of Biochemistry and Pharmacy, University of CuencaCuenca, Ecuador.
Ismael Lares-AsseffPharmacogenomics Academia, National Polytechnic Institute-CIIDIR Durango, Mexico.
Aurea LimaCESPU, Instituto de Investigação e Formação Avançada em Ciências e Tecnologias da Saúde Gandra, Portugal.
Aarón Reyes-EspinozaState Center of Cancerology of SSA Durango, Mexico.
Verónica Loera-CastañedaPharmacogenomics Academia, National Polytechnic Institute-CIIDIR Durango, Mexico.
Martha Sosa-MacíasPharmacogenomics Academia, National Polytechnic Institute-CIIDIR Durango, Mexico.
Carlos Galaviz-HernándezPharmacogenomics Academia, National Polytechnic Institute-CIIDIR Durango, Mexico.
María C Arias-PeláezInstitute of Scientific Research of the University Juarez of State of Durango Durango, Mexico.
Miguel A Reyes-LópezCenter of Biotechnology Genomics, National Polytechnic Institute Reynosa, Mexico.
Luis A QuiñonesPharmacological and Molecular Program, Laboratory of Chemical Carcinogenesis and Pharmacogenetics (CQF), Faculty of Medicine, ICBM, University of Chile Santiago, Chile.
Durango Institute of Technology · MXInstituto de Investigação e Formação Avançada em Ciências e Tecnologias da SaúdeInstituto Politécnico Nacional · MXTecnológico Nacional de México · MXUniversidad Juárez del Estado de Durango · MXUniversity of Chile · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acute lymphoblastic leukemia (ALL) is a frequent neoplasia occurring in children. The most commonly used drug for the treatment of ALL is methotrexate (MTX), an anti-folate agent. Previous studies suggest that folate transporters play a role in ALL prognosis and that genetic polymorphism of genes encoding folate transporters may increase the risk of ALL. Therefore, the main goal of this study was to determine the associations among six genetic polymorphisms in four genes related with the folate transporter pathway to determine a relationship with the occurrence of ALL in Mexican children. A case-control study was performed in 73 ALL children and 133 healthy children from Northern and Northwestern Mexico. COL18A1 (rs2274808), SLC19A1 (rs2838956), ABCB1 (rs1045642 and rs1128503), and ABCC5 (rs9838667 and rs3792585). Polymorphisms were assayed through qPCR. Our results showed an increased ALL risk in children carrying CT genotype (OR = 2.55, CI 95% 1.11-5.83, p = 0.0001) and TT genotype (OR = 21.05, CI 95% 5.62-78.87, p < 0.0001) of COL18A1 rs2274808; in SLC19A1 rs2838956 AG carriers (OR = 44.69, CI 95% 10.42-191.63, p = 0.0001); in ABCB1 rs1045642 TT carriers (OR = 13.76, CI 95% 5.94-31.88, p = 0.0001); in ABCC5 rs9838667 AC carriers (OR = 2.61, CI 95% 1.05-6.48, p < 0.05); and in ABCC5 rs3792585 CC carriers (OR = 9.99, CI 95% 3.19-31.28, p = 0.004). Moreover, several combinations of genetic polymorphisms were found to be significantly associated with a risk for ALL. Finally, two combinations of ABCC5 polymorphisms resulted in protection from this neoplasia. In conclusion, certain genetic polymorphisms related to the folate transport pathway, particularly COL18A1 rs2274808, SLC19A1 rs2838956, ABCB1 rs1045642, and ABCC5 rs3792585, were associated with an increased risk for ALL in Mexican children.

Indexed as

acute lymphoblastic leukemiafolate transportersgenetic polymorphismsmethotrexatemolecular epidemiology

Identifiers

PMID27547186
PMCPMC4974492
OpenAlexW2481018456

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.