Evidence map›Paper›PMID 27546577›Full record

ArticleCurrent biology : CB2016

The pdm3 Locus Is a Hotspot for Recurrent Evolution of Female-Limited Color Dimorphism in Drosophila.

Amir Yassin, Emily K Delaney, Adam J Reddiex, Thaddeus D Seher, Héloïse Bastide, Nicholas C Appleton, Justin B Lack, Jean R David, Stephen F Chenoweth, John E Pool and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Article
  3. Functional genetic elements of a butterfly mimicry supergene.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Ecology and sexual conflict drive the macroevolutionary dynamics of female-limited color polymorphisms in damselflies.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  18. The effect of theBiology letters · 2021
    Article
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  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Amir YassinLaboratory of Genetics, University of Wisconsin-Madison, 425-G Henry Mall, Madison, WI 53705, USA.
Emily K DelaneyDepartment of Evolution and Ecology, University of California, Davis, 1 Shields Avenue, Davis, CA 95616, USA.
Adam J ReddiexSchool of Biological Sciences, University of Queensland, St. Lucia, Brisbane 4072, Australia.
Thaddeus D SeherDepartment of Evolution and Ecology, University of California, Davis, 1 Shields Avenue, Davis, CA 95616, USA; Department of Quantitative and Systems Biology, University of California, Merced, 5200 North Lake Road, Merced, CA 95343, USA.
Héloïse BastideLaboratory of Genetics, University of Wisconsin-Madison, 425-G Henry Mall, Madison, WI 53705, USA.
Nicholas C AppletonSchool of Biological Sciences, University of Queensland, St. Lucia, Brisbane 4072, Australia.
Justin B LackLaboratory of Genetics, University of Wisconsin-Madison, 425-G Henry Mall, Madison, WI 53705, USA.
Jean R DavidLaboratoire Evolution, Génomes, Comportement, Ecologie (EGCE), CNRS, IRD, Université Paris Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette, France.
Stephen F ChenowethSchool of Biological Sciences, University of Queensland, St. Lucia, Brisbane 4072, Australia.
John E PoolLaboratory of Genetics, University of Wisconsin-Madison, 425-G Henry Mall, Madison, WI 53705, USA. Electronic address: jpool@wisc.edu.
Artyom KoppDepartment of Evolution and Ecology, University of California, Davis, 1 Shields Avenue, Davis, CA 95616, USA. Electronic address: akopp@ucdavis.edu.
University of Wisconsin–Madison · USUniversity of California, Davis · USUniversity of Queensland · AUInstitut de Recherche pour le Développement · FR

Funding

Institutional Training in the Genomic SciencesT32HG002760 · NHGRI · UNIVERSITY OF WISCONSIN-MADISON · PI Qiongshi Lu · 2003 to 2026
$17.7M
Drosophila Transgenic RNAi Resource ProjectR01GM084947 · NIGMS · HARVARD MEDICAL SCHOOL · PI PERRIMON, NORBERT · 2008 to 2019
$9.8M
Causes and Consequences of Size Evolution in Drosophila melanogasterR01GM111797 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI POOL, JOHN E · 2014 to 2018
$1.4M
NHGRI NIH HHS T32 HG002760NIGMS NIH HHS R01 GM084947NIGMS NIH HHS R01 GM111797
6 · The paper itself

Abstract

Sex-limited polymorphisms are an intriguing form of sexual dimorphism that offer unique opportunities to reconstruct the evolutionary changes that decouple male and female traits encoded by a shared genome. We investigated the genetic basis of a Mendelian female-limited color dimorphism (FLCD) that segregates in natural populations of more than 20 species of the Drosophila montium subgroup. In these species, females have alternative abdominal color morphs, light and dark, whereas males have only one color morph in each species. A comprehensive molecular phylogeny of the montium subgroup supports multiple origins of FLCD. Despite this, we mapped FLCD to the same locus in four distantly related species-the transcription factor POU domain motif 3 (pdm3), which acts as a repressor of abdominal pigmentation in D. melanogaster. In D. serrata, FLCD maps to a structural variant in the first intron of pdm3; however, this variant is not found in the three other species-D. kikkawai, D. leontia, and D. burlai-and sequence analysis strongly suggests the pdm3 alleles responsible for FLCD originated independently at least three times. We propose that cis-regulatory changes in pdm3 form sexually dimorphic and monomorphic alleles that segregate within species and are preserved, at least in one species, by structural variation. Surprisingly, pdm3 has not been implicated in the evolution of sex-specific pigmentation outside the montium subgroup, suggesting that the genetic paths to sexual dimorphism may be constrained within a clade but variable across clades.

Indexed as

Biological EvolutionGene Expression RegulationAnimalsColorDrosophilaDrosophila ProteinsFemalePhenotypePhylogenyPigmentationPOU Domain FactorsSequence AlignmentSequence Analysis, DNASpecies SpecificityDrosophila ProteinsPdm3 protein, DrosophilaPOU Domain Factorsabdominal pigmentationparallel evolutionpdm3sex-limited polymorphismsexual dimorphism

Identifiers

PMID27546577
PMCPMC5450831
OpenAlexW2515181769

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.