Evidence map›Paper›PMID 27544267›Full record

ArticleTransgenic research2016

Marker-free PLRV resistant potato mediated by Cre-loxP excision and RNAi.

Jeanette Orbegozo, Dennis Solorzano, Wilmer J Cuellar, Ida Bartolini, Maria Lupe Roman, Marc Ghislain, Jan Kreuze

Open access · hybridAbstract read
In one paragraph

Article in Transgenic research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Transgenic Improvement for Biotic Resistance of Crops.International journal of molecular sciences · 2022
    Review
  4. Review
  5. Eradication ofFrontiers in plant science · 2022
    Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Jeanette OrbegozoInternational Potato Center (CIP), P.O. Box 1558, Lima 12, Peru.
Dennis SolorzanoInternational Potato Center (CIP), P.O. Box 1558, Lima 12, Peru.
Wilmer J CuellarInternational Potato Center (CIP), P.O. Box 1558, Lima 12, Peru.
Ida BartoliniInternational Potato Center (CIP), P.O. Box 1558, Lima 12, Peru.
Maria Lupe RomanInternational Potato Center (CIP), P.O. Box 1558, Lima 12, Peru.
Marc GhislainInternational Potato Center (CIP), P.O. Box 1558, Lima 12, Peru.
Jan KreuzeInternational Potato Center (CIP), P.O. Box 1558, Lima 12, Peru. j.kreuze@cgiar.org.
International Potato Center · PEInternational Center for Tropical Agriculture · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An inverted repeat construct corresponding to a segment of the potato leaf roll virus coat protein gene was created under control of a constitutive promoter and transferred into a transformation vector with a heat inducible Cre-loxP system to excise the nptII antibiotic resistance marker gene. Fifty-eight transgenic events were evaluated for resistance to PLRV by greenhouse inoculations, which lead to the identification of 7 highly resistant events, of which 4 were extremely resistant. This resistance was also highly effective against accumulation in subsequent tuber generations from inoculated plants, which has not been reported before. Northern blot analysis showed correlation of PLRV specific siRNA accumulation with the level of PLRV resistance. Heat mediated excision of the nptII antibiotic resistance gene in PLRV resistant events was highly efficient in one event with full excision in 71 % of treated explants. On the other hand 8 out of 10 analyzed events showed truncated T-DNA insertions lacking one of the two loxP sites as determined by PCR and confirmed by sequencing flanking regions in 2 events, suggesting cryptic LB sites in the non-coding region between the nptII gene and the flanking loxP site. Accordingly, it is proposed to modify the Cre-loxP vector by reducing the 1 kb size of the region between nptII, loxP, and the LB.

Indexed as

DNA, BacterialGenetic VectorsIntegrasesInverted Repeat SequencesLuteoviridaePlants, Genetically ModifiedRNA InterferenceSolanum tuberosumViral Envelope ProteinsCre recombinaseDNA, BacterialIntegrasesT-DNAViral Envelope ProteinsCre-loxPMarker freePotato leaf-roll virus resistanceRNAi

Identifiers

PMID27544267
PMCPMC5104775
OpenAlexW2509745525

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.