Evidence map›Paper›PMID 27543267›Full record

ArticleBMC systems biology2016

A dynamical systems model of progesterone receptor interactions with inflammation in human parturition.

Douglas Brubaker, Alethea Barbaro, Mark R Chance, Sam Mesiano

Open access · diamondAbstract read
In one paragraph

Article in BMC systems biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Douglas BrubakerCenter for Proteomics and Bioinformatics, Case Western Reserve University, 11900 Euclid Avenue, Cleveland, 44106, OH, USA.
Alethea Barbaro, 11900 Euclid Avenue, Cleveland, 44106, OH, USA.
Mark R ChanceCenter for Proteomics and Bioinformatics, Case Western Reserve University, 11900 Euclid Avenue, Cleveland, 44106, OH, USA.
Sam MesianoDepartment of Reproductive Biology, Case Western Reserve University, 11900 Euclid Avenue, Cleveland, 44106, OH, USA. sam.mesiano@case.edu.
Case Western Reserve University · US

Funding

BIOMETRIC-GENETIC ANALYSIS OF CARDIOVASCULAR DISEASET32HL007567 · NHLBI · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI ZHU, XIAOFENG · 1985 to 2021
$6.0M
Role of nuclear progesterone receptors in the control of human parturitionR01HD069819 · NICHD · CASE WESTERN RESERVE UNIVERSITY · PI MESIANO, SAM ANTONIO · 2012 to 2016
$1.6M
NHLBI NIH HHS T32 HL007567NICHD NIH HHS R01 HD069819
6 · The paper itself

Abstract

backgroundProgesterone promotes uterine relaxation and is essential for the maintenance of pregnancy. Withdrawal of progesterone activity and increased inflammation within the uterine tissues are key triggers for parturition. Progesterone actions in myometrial cells are mediated by two progesterone receptor (PR) isoforms, PR-A and PR-B, that function as ligand-activated transcription factors. PR-B mediates relaxatory actions of progesterone, in part, by decreasing myometrial cell responsiveness to pro-inflammatory stimuli. These same pro-inflammatory stimuli promote the expression of PR-A which inhibits the anti-inflammatory activity of PR-B. Competitive interaction between the progesterone receptors then augments myometrial responsiveness to pro-inflammatory stimuli. The interaction between PR-B transcriptional activity and inflammation in the pregnancy myometrium is examined using a dynamical systems model in which quiescence and labor are represented as phase-space equilibrium points. Our model shows that PR-B transcriptional activity and the inflammatory load determine the stability of the quiescent and laboring phenotypes. The model is tested using published transcriptome datasets describing the mRNA abundances in the myometrium before and after the onset of labor at term. Surrogate transcripts were selected to reflect PR-B transcriptional activity and inflammation status.

resultsThe model coupling PR-B activity and inflammation predicts contractile status (i.e., laboring or quiescent) with high precision and recall and outperforms uncoupled single and two-gene classifiers. Linear stability analysis shows that phase space bifurcations exist in our model that may reflect the phenotypic states of the pregnancy uterus. The model describes a possible tipping point for the transition of the quiescent to the contractile laboring phenotype.

conclusionsOur model describes the functional interaction between the PR-A:PR-B hypothesis and tissue level inflammation in the pregnancy uterus and is a first step in more sophisticated dynamical systems modeling of human partition. The model explains observed biochemical dynamics and as such will be useful for the development of a range of systems-based models using emerging data to predict preterm birth and identify strategies for its prevention.

Indexed as

Models, BiologicalParturitionFemaleHumansInflammationPregnancyPremature BirthReceptors, ProgesteroneRiskReceptors, ProgesteroneDynamical systemsInflammationMyometriumParturitionProgesterone receptor

Identifiers

PMID27543267
PMCPMC4992259
OpenAlexW2518097617

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.