Evidence map›Paper›PMID 27543110›Full record

ArticleThe Journal of general virology2016

Characterization of the new GII.17 norovirus variant that emerged recently as the predominant strain in China.

Miao Jin, Yong-Kang Zhou, Hua-Ping Xie, Jian-Guang Fu, Ya-Qing He, Shuang Zhang, Hong-Bo Jing, Xiang-Yu Kong, Xiao-Man Sun, Hui-Ying Li and 11 more

Abstract read
In one paragraph

Article in The Journal of general virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 88 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 10 institutions in 2 countries.

Miao JinKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Yong-Kang ZhouKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Hua-Ping XieGuangzhou Center for Disease Control and Prevention, Guangzhou, Guangdong Province, PR China.
Jian-Guang FuJiangsu Provincial Center for Disease Control and Prevention, Jiangsu Province, PR China.
Ya-Qing HeShenzhen Center for Disease Control and Prevention, Shenzhen, Guangdong Province, PR China.
Shuang ZhangBeijing Shunyi Center for Disease Control and Prevention, Shunyi District, Beijing, PR China.
Hong-Bo JingBeijing Shunyi Center for Disease Control and Prevention, Shunyi District, Beijing, PR China.
Xiang-Yu KongKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Xiao-Man SunKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Hui-Ying LiKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Qing ZhangKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Kai LiGuangzhou Huadu Center for Disease Control and Prevention, Huadu District, Guangzhou, Guangdong Province, PR China.
Ying-Jun ZhangGuangzhou Huadu Center for Disease Control and Prevention, Huadu District, Guangzhou, Guangdong Province, PR China.
De-Qian ZhouGuangzhou Yuexiu Center for Disease Control and Prevention, Yuexiu District, Guangzhou, Guangdong Province, PR China.
Wei-Jia XingDivision of Infectious Disease, Key Laboratory of Surveillance and Early Warning on Infectious Disease, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Qiao-Hong LiaoDivision of Infectious Disease, Key Laboratory of Surveillance and Early Warning on Infectious Disease, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Na LiuDivision of Infectious Disease, Key Laboratory of Surveillance and Early Warning on Infectious Disease, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Hong-Jie YuDivision of Infectious Disease, Key Laboratory of Surveillance and Early Warning on Infectious Disease, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Xi JiangDivisions of Infectious Diseases, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Ming TanDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Zhao-Jun DuanKey Laboratory of Medical Virology and Viral Diseases, Ministry of Health of the People's Republic of China, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Chinese Center For Disease Control and Prevention · CNGuangzhou Center for Disease Control and Prevention · CNNational Institute for Viral Disease Control and Prevention · CNNational Health and Family Planning Commission · CNShunyi Hospital of Beijing Traditional Chinese Medicine Hospital · CNCincinnati Children's Hospital Medical Center · USJiangsu Provincial Center for Disease Control and Prevention · CNLanzhou University · CNShenzhen Center for Disease Control and Prevention · CNUniversity of Cincinnati Medical Center · US

Funding

HBGA receptors in host cell entry and infection of norovirusR01AI111095 · NIAID · PURDUE UNIVERSITY · PI JIANG, WEN, JIANG, XI · 2015 to 2019
$2.5M
Human monoclonal antibodies against norovirus.R21AI122132 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI JIANG, XI · 2016 to 2017
$429k
NIAID NIH HHS R01 AI111095NIAID NIH HHS R21 AI122132
6 · The paper itself

Abstract

Human noroviruses are the most important viral pathogens causing epidemic acute gastroenteritis, in which the GII.4 viruses have been predominant worldwide for the past decades. During 2014-2015 winter season, a new GII.17 variant emerged as the predominant virus in China surpassing the GII.4 virus in causing significantly increased acute gastroenteritis outbreaks. Genome sequences of the new GII.17 variant was determined and compared with other GII.17 noroviruses, revealing residue substitutions at specific locations, including the histo-blood group antigen-binding site and the putative antigenic epitopes. Further study of GII.17 outbreaks focusing on host susceptibility showed that the new GII.17 variant infected secretor individuals of A, B, O and Lewis types. Accordingly, the P particles of the new GII.17 variant bound secretor saliva samples of A, B, O and Lewis types with significantly higher binding signals than those of the P particles of the previous GII.17 variants. In addition, human sera collected from the outbreaks exhibited stronger blockade against the binding of the new GII.17 P particles to saliva samples than those against the binding between the P particles of previous GII.17 variants and saliva samples. Taken together, our data strongly suggested that the new GII.17 variant gained new histo-blood group antigen-binding ability and antigenic features, which may contribute to its predominance in causing human norovirus epidemics.

Indexed as

Blood Group AntigensCaliciviridae InfectionsChinaDisease OutbreaksEvolution, MolecularFecesGastroenteritisHumansNorovirusPhylogenyBlood Group Antigens

Identifiers

PMID27543110
PMCPMC5756485
OpenAlexW2509602381

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.