Evidence map›Paper›PMID 27541497›Full record

ArticlePlanta2017

Analysis of plant growth-promoting properties of Bacillus amyloliquefaciens UCMB5113 using Arabidopsis thaliana as host plant.

Shashidar Asari, Danuše Tarkowská, Jakub Rolčík, Ondřej Novák, David Velázquez Palmero, Sarosh Bejai, Johan Meijer

Open access · hybridAbstract read
In one paragraph

Article in Planta, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
21.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it, 149 citations in OpenAlex.

  1. Pooled it
  2. Draft genome sequences of threeMicrobiology resource announcements · 2026
    Article
  3. Plants (Basel, Switzerland) · 2026
    Review
  4. Evaluation of Stress-TolerantPlants (Basel, Switzerland) · 2025
    Article
  5. Review
  6. The Effect of Plant Growth-Promoting BacteriaInternational journal of molecular sciences · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Effects onMicroorganisms · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Metabolites fromPlants (Basel, Switzerland) · 2022
    Article
  18. RhizosphericFrontiers in plant science · 2022
    Article
  19. NovelFrontiers in microbiology · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Shashidar AsariDepartment of Plant Biology, Uppsala Biocenter, Swedish University of Agricultural Sciences and Linnéan Center for Plant Biology, Box 7080, S75007, Uppsala, Sweden.
Danuše TarkowskáLaboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany ASCR and Palacký University, Šlechtitelů 11, CZ-783 71, Olomouc, Czech Republic.
Jakub RolčíkLaboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany ASCR and Palacký University, Šlechtitelů 11, CZ-783 71, Olomouc, Czech Republic.
Ondřej NovákLaboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany ASCR and Palacký University, Šlechtitelů 11, CZ-783 71, Olomouc, Czech Republic.
David Velázquez PalmeroDepartment of Plant Biology, Uppsala Biocenter, Swedish University of Agricultural Sciences and Linnéan Center for Plant Biology, Box 7080, S75007, Uppsala, Sweden.
Sarosh BejaiDepartment of Plant Biology, Uppsala Biocenter, Swedish University of Agricultural Sciences and Linnéan Center for Plant Biology, Box 7080, S75007, Uppsala, Sweden.
Johan MeijerDepartment of Plant Biology, Uppsala Biocenter, Swedish University of Agricultural Sciences and Linnéan Center for Plant Biology, Box 7080, S75007, Uppsala, Sweden. johan.meijer@slu.se.
Swedish University of Agricultural Sciences · SECzech Academy of Sciences, Institute of Experimental Botany · CZPalacký University Olomouc · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionThis study showed that Bacillus amyloliquefaciens UCMB5113 colonizing Arabidopsis roots changed root structure and promoted growth implying the usability of this strain as a novel tool to support sustainable crop production. Root architecture plays a crucial role for plants to ensure uptake of water, minerals and nutrients and to provide anchorage in the soil. The root is a dynamic structure with plastic growth and branching depending on the continuous integration of internal and environmental factors. The rhizosphere contains a complex microbiota, where some microbes can colonize plant roots and support growth and stress tolerance. Here, we report that the rhizobacterium Bacillus amyloliquefaciens subsp. plantarum UCMB5113 stimulated the growth of Arabidopsis thaliana Col-0 by increased lateral root outgrowth and elongation and root-hair formation, although primary root elongation was inhibited. In addition, the growth of the above ground tissues was stimulated by UCMB5113. Specific hormone reporter gene lines were tested which suggested a role for at least auxin and cytokinin signaling during rhizobacterial modulation of Arabidopsis root architecture. UCMB5113 produced cytokinins and indole-3-acetic acid, and the formation of the latter was stimulated by root exudates and tryptophan. The plant growth promotion effect by UCMB5113 did not appear to depend on jasmonic acid in contrast to the disease suppression effect in plants. UCMB5113 exudates inhibited primary root growth, while a semi-purified lipopeptide fraction did not and resulted in the overall growth promotion indicating an interplay of many different bacterial compounds that affect the root growth of the host plant. This study illustrates that beneficial microbes interact with plants in root development via classic and novel signals.

Indexed as

Host-Pathogen InteractionsArabidopsisBacillus amyloliquefaciensBrassinosteroidsCytokininsGibberellinsIndoleacetic AcidsLipopeptidesPlant Growth RegulatorsPlant RootsSeedlingsBrassinosteroidsCytokininsGibberellinsIndoleacetic AcidsLipopeptidesPlant Growth RegulatorsBeneficial bacteriaBiocontrolGrowth promotionPhytohormonesRhizosphereRoot structure

Identifiers

PMID27541497
PMCPMC5226999
OpenAlexW2516444139

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.