Evidence map›Paper›PMID 27539848›Full record

ArticleThe Journal of biological chemistry2016

Structural Basis for Interactions Between Contactin Family Members and Protein-tyrosine Phosphatase Receptor Type G in Neural Tissues.

Roman M Nikolaienko, Michal Hammel, Véronique Dubreuil, Rana Zalmai, David R Hall, Nurjahan Mehzabeen, Sebastian J Karuppan, Sheila Harroch, Salvatore L Stella, Samuel Bouyain

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Molecular mechanism of contactin 2 homophilic interaction.Structure (London, England : 1993) · 2024
    Article
  7. Article
  8. Article
  9. Altered plasma membrane abundance of the sulfatide-binding protein NF155 links glycosphingolipid imbalances to demyelination.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Structure and evolution of neuronal wiring receptors and ligands.Developmental dynamics : an official publication of the American Association of Anatomists · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Genetics and the heart rate response to exercise.Cellular and molecular life sciences : CMLS · 2019
    Review
  18. Review
  19. Article
  20. Latrophilin's Social Protein Network.Frontiers in neuroscience · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Roman M NikolaienkoFrom the Division of Molecular Biology and Biochemistry, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110.
Michal Hammelthe Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.
Véronique Dubreuilthe Départment de Neuroscience, Institut Pasteur de Paris, 25-28 Rue du Dr. Roux, 75624 Paris, France.
Rana ZalmaiFrom the Division of Molecular Biology and Biochemistry, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110.
David R HallFrom the Division of Molecular Biology and Biochemistry, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110.
Nurjahan MehzabeenFrom the Division of Molecular Biology and Biochemistry, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110.
Sebastian J KaruppanFrom the Division of Molecular Biology and Biochemistry, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110.
Sheila HarrochUniversité Paris Diderot, Sorbonne Paris Cité, Epigenetics and Cell Fate, UMR 7216, CNRS, Paris, France, and.
Salvatore L Stellathe Department of Basic Medical Science, University of Missouri-Kansas City School of Medicine, Kansas City, Missouri 64108.
Samuel BouyainFrom the Division of Molecular Biology and Biochemistry, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110, bouyains@umkc.edu.
University of Missouri–Kansas City · USCentre National de la Recherche Scientifique · FREpigénétique et Destin Cellulaire · FRLawrence Berkeley National Laboratory · US

Funding

Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
MINOS (Macromolecular Insights on Nucleic acids Optimized by Scattering)R01GM105404 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI TAINER, JOHN A. · 2012 to 2015
$2.1M
STRUCTURAL AND BIOCHEMICAL STUDIES OF PROTEIN TYROSINE PHOSPHATASE FUNCTIONR01GM088806 · NIGMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI BOUYAIN, SAMUEL · 2010 to 2014
$1.2M
NIGMS NIH HHS P41 GM103311NIGMS NIH HHS R01 GM088806NIGMS NIH HHS R01 GM105404
6 · The paper itself

Abstract

Protein-tyrosine phosphatase receptor type G (RPTPγ/PTPRG) interacts in vitro with contactin-3-6 (CNTN3-6), a group of glycophosphatidylinositol-anchored cell adhesion molecules involved in the wiring of the nervous system. In addition to PTPRG, CNTNs associate with multiple transmembrane proteins and signal inside the cell via cis-binding partners to alleviate the absence of an intracellular region. Here, we use comprehensive biochemical and structural analyses to demonstrate that PTPRG·CNTN3-6 complexes share similar binding affinities and a conserved arrangement. Furthermore, as a first step to identifying PTPRG·CNTN complexes in vivo, we found that PTPRG and CNTN3 associate in the outer segments of mouse rod photoreceptor cells. In particular, PTPRG and CNTN3 form cis-complexes at the surface of photoreceptors yet interact in trans when expressed on the surfaces of apposing cells. Further structural analyses suggest that all CNTN ectodomains adopt a bent conformation and might lie parallel to the cell surface to accommodate these cis and trans binding modes. Taken together, these studies identify a PTPRG·CNTN complex in vivo and provide novel insights into PTPRG- and CNTN-mediated signaling.

Indexed as

ContactinsMultiprotein ComplexesNerve Tissue ProteinsReceptor-Like Protein Tyrosine Phosphatases, Class 5AnimalsHumansMiceModels, BiologicalModels, MolecularNerve TissueSignal TransductionContactinsMultiprotein ComplexesNerve Tissue ProteinsPtprg protein, mouseReceptor-Like Protein Tyrosine Phosphatases, Class 5cell adhesioncell surfacecontactincrystal structureimmunoglobulin|L-like domainprotein phosphataseretina

Identifiers

PMID27539848
PMCPMC5076805
OpenAlexW2507251123

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.