Evidence map›Paper›PMID 27538881›Full record

ArticleScientific reports2016

A calcium sensor - protein kinase signaling module diversified in plants and is retained in all lineages of Bikonta species.

Linda Beckmann, Kai H Edel, Oliver Batistič, Jörg Kudla

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. The Roles of Calcineurin B-like Proteins in Plants under Salt Stress.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Article
  8. Structural and Biochemical Analyses of the Butanol Dehydrogenase fromInternational journal of molecular sciences · 2023
    Article
  9. Review
  10. Article
  11. Natural variation of an EF-hand CaNature communications · 2020
    Article
  12. Insights into the red algae and eukaryotic evolution from the genome ofProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Frontiers in plant science · 2017
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Linda BeckmannInstitut für Biologie und Biotechnologie der Pflanzen, Universität Münster, Schlossplatz 7, 48149 Münster, Germany.
Kai H EdelInstitut für Biologie und Biotechnologie der Pflanzen, Universität Münster, Schlossplatz 7, 48149 Münster, Germany.
Oliver BatističInstitut für Biologie und Biotechnologie der Pflanzen, Universität Münster, Schlossplatz 7, 48149 Münster, Germany.
Jörg KudlaInstitut für Biologie und Biotechnologie der Pflanzen, Universität Münster, Schlossplatz 7, 48149 Münster, Germany.
University of Münster · DEKing Saud University · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcium (Ca(2+)) signaling is a universal mechanism of signal transduction and involves Ca(2+) signal formation and decoding of information by Ca(2+) binding proteins. Calcineurin B-like proteins (CBLs), which upon Ca(2+) binding activate CBL-interacting protein kinases (CIPKs) regulate a multitude of physiological processes in plants. Here, we combine phylogenomics and functional analyses to investigate the occurrence and structural conservation of CBL and CIPK proteins in 26 species representing all major clades of eukaryotes. We demonstrate the presence of at least singular CBL-CIPK pairs in representatives of Archaeplastida, Chromalveolates and Excavates and their general absence in Opisthokonta and Amoebozoa. This denotes CBL-CIPK complexes as evolutionary ancient Ca(2+) signaling modules that likely evolved in the ancestor of all Bikonta. Furthermore, we functionally characterize the CBLs and CIPK from the parabasalid human pathogen Trichomonas vaginalis. Our results reveal strict evolutionary conservation of functionally important structural features, preservation of biochemical properties and a remarkable cross-kingdom protein-protein interaction potential between CBLs and CIPKs from Arabidopsis thaliana and T. vaginalis. Together our findings suggest an ancient evolutionary origin of a functional CBL-CIPK signaling module close to the root of eukaryotic evolution and provide insights into the initial evolution of signaling networks and Ca(2+) signaling specificity.

Indexed as

Evolution, MolecularPhylogenyPlant ProteinsPlantsProtein Serine-Threonine KinasesProtozoan ProteinsTrichomonas vaginalisPlant ProteinsProtein Serine-Threonine KinasesProtozoan Proteins

Identifiers

PMID27538881
PMCPMC4990929
OpenAlexW2513364632

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.