Evidence map›Paper›PMID 27534746›Full record

ArticleBMC medical genomics2016

Major methylation alterations on the CpG markers of inflammatory immune associated genes after IVIG treatment in Kawasaki disease.

Sung-Chou Li, Wen-Ching Chan, Ying-Hsien Huang, Mindy Ming-Huey Guo, Hong-Ren Yu, Fu-Chen Huang, Hsing-Chun Kuo, Ho-Chang Kuo

Open access · goldAbstract read
In one paragraph

Article in BMC medical genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Regulatory T Cells-Related Genes Are under DNA Methylation Influence.International journal of molecular sciences · 2021
    Review
  8. Long-Term Hypermethylation ofJournal of clinical medicine · 2021
    Article
  9. Epigenetics in Kawasaki Disease.Frontiers in pediatrics · 2021
    Review
  10. Article
  11. Article
  12. Increase expression of CD177 in Kawasaki disease.Pediatric rheumatology online journal · 2019
    Article
  13. Review
  14. Decreased Steroid Hormone ReceptorFrontiers in pediatrics · 2019
    Article
  15. Article
  16. Immunomics in Pediatric Rheumatic Diseases.Frontiers in medicine · 2019
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Sung-Chou LiGenomics and Proteomics Core Laboratory, Department of Medical Research, Kaohsiung Chang Gung Memorial Hospital and Chang Gung University College of Medicine, Kaohsiung, Taiwan.
Wen-Ching ChanCenter for Research Informatics, The University of Chicago, Chicago, IL, USA.
Ying-Hsien HuangKawasaki Disease Center, Kaohsiung Chang Gung Memorial Hospital, No.123, Dapi Rd, Niaosong Distict, Kaohsiung, 83301, Taiwan.
Mindy Ming-Huey GuoKawasaki Disease Center, Kaohsiung Chang Gung Memorial Hospital, No.123, Dapi Rd, Niaosong Distict, Kaohsiung, 83301, Taiwan.
Hong-Ren YuKawasaki Disease Center, Kaohsiung Chang Gung Memorial Hospital, No.123, Dapi Rd, Niaosong Distict, Kaohsiung, 83301, Taiwan.
Fu-Chen HuangKawasaki Disease Center, Kaohsiung Chang Gung Memorial Hospital, No.123, Dapi Rd, Niaosong Distict, Kaohsiung, 83301, Taiwan.
Hsing-Chun KuoDepartment of Nursing, Chang Gung University of Science and Technology, Chiayi, Taiwan.
Ho-Chang KuoKawasaki Disease Center, Kaohsiung Chang Gung Memorial Hospital, No.123, Dapi Rd, Niaosong Distict, Kaohsiung, 83301, Taiwan. erickuo48@yahoo.com.tw.
Kaohsiung Chang Gung Memorial Hospital · TWChang Gung University · TWChang Gung University of Science and Technology · TWUniversity of Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundKawasaki disease (KD) is an autoimmune disease preferentially attacking children younger than five years worldwide. So far, the principal treatment to KD is the administration of Intravenous immunoglobulin (IVIG). Although DNA methylation plays important regulation roles in diseases, few studies investigated the regulation roles of DNA methylation in KD.

methodsIn this study, we focused not only on the DNA methylation alterations resulted from KD onset but also on DNA methylation alterations resulted from IVIG administration. To do so, we investigated the effects of KD's onset and IVIG administration on CpG marker's methylation alterations.

resultsWe first found that DNA methylation alterations reflecting disease onset or IVIG administration are contributed mainly by the CpG markers on autosomes. In addition, we also demonstrated that some CpG markers carry methylation alteration among samples, forcing the expression abundance of the downstream genes to be also altered and negatively correlated with methylation profile. Finally, compared with KD's onset, IVIG administration brings stronger impact on methylation alteration. And, such alterations were conducted mainly by hyper-methylating CpG markers, forcing the corresponding genes to keep lower expression levels. Moreover, the genes regulated by the altered CpG markers with IVIG administration are enriched in the pathways associated with inflammatory immune response.

conclusionsIn summary, our result provides researchers with another way into the regulation mechanism through which IVIG represses excessive inflammatory responses.

Indexed as

Case-Control StudiesCpG IslandsDNA MethylationGenetic MarkersHumansImmunoglobulins, IntravenousInflammationMucocutaneous Lymph Node SyndromeTranscriptomeGenetic MarkersImmunoglobulins, IntravenousCpG markerDNA methylationIntravenous immunoglobulinKawasaki diseaseMethylation alteration

Identifiers

PMID27534746
PMCPMC4989893
OpenAlexW2514383942

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.