Evidence map›Paper›PMID 27531226›Full record

ArticleThe Plant cell2016

DNA DAMAGE BINDING PROTEIN2 Shapes the DNA Methylation Landscape.

Catherine Schalk, Stéphanie Drevensek, Amira Kramdi, Mohamed Kassam, Ikhlak Ahmed, Valérie Cognat, Stéfanie Graindorge, Marc Bergdoll, Nicolas Baumberger, Dimitri Heintz and 5 more

Abstract read
In one paragraph

Article in The Plant cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Active DNA Demethylation in Plants.International journal of molecular sciences · 2019
    Review
  9. Chromatin Remodeling and Epigenetic Regulation in Plant DNA Damage Repair.International journal of molecular sciences · 2019
    Review
  10. Article
  11. Review
  12. Review
  13. Small RNA-mediated repair of UV-induced DNA lesions by the DNA DAMAGE-BINDING PROTEIN 2 and ARGONAUTE 1.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Catherine SchalkInstitut de Biologie Moléculaire de Plantes du CNRS, UPR 2357, F-67084 Strasbourg, France.
Stéphanie DrevensekEcole Normale Supérieure, PSL Research University, Institut de Biologie de l'Ecole Normale Supérieure, CNRS UMR 8197, INSERM U1024, F-75005 Paris, France.ORCID http://orcid.org/0000-0002-2356-7021
Amira KramdiEcole Normale Supérieure, PSL Research University, Institut de Biologie de l'Ecole Normale Supérieure, CNRS UMR 8197, INSERM U1024, F-75005 Paris, France.
Mohamed KassamEcole Normale Supérieure, PSL Research University, Institut de Biologie de l'Ecole Normale Supérieure, CNRS UMR 8197, INSERM U1024, F-75005 Paris, France.ORCID http://orcid.org/0000-0002-9913-1398
Ikhlak AhmedEcole Normale Supérieure, PSL Research University, Institut de Biologie de l'Ecole Normale Supérieure, CNRS UMR 8197, INSERM U1024, F-75005 Paris, France.
Valérie CognatInstitut de Biologie Moléculaire de Plantes du CNRS, UPR 2357, F-67084 Strasbourg, France.
Stéfanie GraindorgeInstitut de Biologie Moléculaire de Plantes du CNRS, UPR 2357, F-67084 Strasbourg, France.
Marc BergdollInstitut de Biologie Moléculaire de Plantes du CNRS, UPR 2357, F-67084 Strasbourg, France.
Nicolas BaumbergerInstitut de Biologie Moléculaire de Plantes du CNRS, UPR 2357, F-67084 Strasbourg, France.
Dimitri HeintzInstitut de Biologie Moléculaire de Plantes du CNRS, UPR 2357, F-67084 Strasbourg, France.
Chris BowlerEcole Normale Supérieure, PSL Research University, Institut de Biologie de l'Ecole Normale Supérieure, CNRS UMR 8197, INSERM U1024, F-75005 Paris, France.
Pascal GenschikInstitut de Biologie Moléculaire de Plantes du CNRS, UPR 2357, F-67084 Strasbourg, France.
Fredy BarnecheEcole Normale Supérieure, PSL Research University, Institut de Biologie de l'Ecole Normale Supérieure, CNRS UMR 8197, INSERM U1024, F-75005 Paris, France.
Vincent ColotEcole Normale Supérieure, PSL Research University, Institut de Biologie de l'Ecole Normale Supérieure, CNRS UMR 8197, INSERM U1024, F-75005 Paris, France.ORCID http://orcid.org/0000-0002-6382-1610
Jean MolinierInstitut de Biologie Moléculaire de Plantes du CNRS, UPR 2357, F-67084 Strasbourg, France jean.molinier@ibmp-cnrs.unistra.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In eukaryotes, DNA repair pathways help to maintain genome integrity and epigenomic patterns. However, the factors at the nexus of DNA repair and chromatin modification/remodeling remain poorly characterized. Here, we uncover a previously unrecognized interplay between the DNA repair factor DNA DAMAGE BINDING PROTEIN2 (DDB2) and the DNA methylation machinery in

Identifiers

PMID27531226
PMCPMC5059809

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.