Evidence map›Paper›PMID 27530713›Full record

ArticleScientific reports2016

CRISPR/Cas9 mediated genome editing in ES cells and its application for chimeric analysis in mice.

Asami Oji, Taichi Noda, Yoshitaka Fujihara, Haruhiko Miyata, Yeon Joo Kim, Masanaga Muto, Kaori Nozawa, Takafumi Matsumura, Ayako Isotani, Masahito Ikawa

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 101 citations in OpenAlex.

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  11. Incomplete activation ofLife science alliance · 2023
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  12. DNAJB7 is dispensable for male fertility in mice.Reproductive biology and endocrinology : RB&E · 2023
    Article
  13. TSKS localizes to nuage in spermatids and regulates cytoplasmic elimination during spermiation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Article
  16. Article
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  18. Article
  19. PCD Genes-From Patients to Model Organisms and Back to Humans.International journal of molecular sciences · 2022
    Review
  20. Review

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Asami OjiResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka 5650871 Japan.
Taichi NodaResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka 5650871 Japan.
Yoshitaka FujiharaResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka 5650871 Japan.
Haruhiko MiyataResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka 5650871 Japan.
Yeon Joo KimResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka 5650871 Japan.
Masanaga MutoResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka 5650871 Japan.
Kaori NozawaResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka 5650871 Japan.
Takafumi MatsumuraResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka 5650871 Japan.
Ayako IsotaniImmunology Frontier Research Center, Osaka University, Suita, Osaka 5650871 Japan.
Masahito IkawaResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka 5650871 Japan.
Osaka University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Targeted gene disrupted mice can be efficiently generated by expressing a single guide RNA (sgRNA)/CAS9 complex in the zygote. However, the limited success of complicated genome editing, such as large deletions, point mutations, and knockins, remains to be improved. Further, the mosaicism in founder generations complicates the genotypic and phenotypic analyses in these animals. Here we show that large deletions with two sgRNAs as well as dsDNA-mediated point mutations are efficient in mouse embryonic stem cells (ESCs). The dsDNA-mediated gene knockins are also feasible in ESCs. Finally, we generated chimeric mice with biallelic mutant ESCs for a lethal gene, Dnajb13, and analyzed their phenotypes. Not only was the lethal phenotype of hydrocephalus suppressed, but we also found that Dnajb13 is required for sperm cilia formation. The combination of biallelic genome editing in ESCs and subsequent chimeric analysis provides a useful tool for rapid gene function analysis in the whole organism.

Indexed as

CRISPR-Cas SystemsAnimalsApoptosis Regulatory ProteinsChimeraEmbryonic Stem CellsFemaleGene DeletionGene EditingGene Knock-In TechniquesGenes, LethalHSP40 Heat-Shock ProteinsHydrocephalusINDEL MutationMaleMiceMice, Inbred C57BLApoptosis Regulatory ProteinsDNAJB13 protein, mouseHSP40 Heat-Shock ProteinsMolecular ChaperonesRNA, Guide, CRISPR-Cas Systems

Identifiers

PMID27530713
PMCPMC4987700
OpenAlexW2515633032

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.