Evidence map›Paper›PMID 27530109›Full record

ArticleBMC genomics2016

The making of a pest: Insights from the evolution of chemosensory receptor families in a pestiferous and invasive fly, Drosophila suzukii.

Paul V Hickner, Chissa L Rivaldi, Cole M Johnson, Madhura Siddappaji, Gregory J Raster, Zainulabeuddin Syed

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 71 citations in OpenAlex.

  1. Receptor sequence divergence, gain, loss, duplication, and neofunctionalization drive olfactory adaptation inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Genomic plasticity drives olfactory adaptation in a pest fly.bioRxiv : the preprint server for biology · 2025
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  11. Proceedings. Biological sciences · 2022
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  16. Insects · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Paul V HicknerDepartment of Biological Sciences & Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, 46556, USA.
Chissa L RivaldiDepartment of Biological Sciences & Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, 46556, USA.
Cole M JohnsonDepartment of Biological Sciences & Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, 46556, USA.
Madhura SiddappajiDepartment of Biological Sciences & Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, 46556, USA.
Gregory J RasterDepartment of Biological Sciences & Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, 46556, USA.
Zainulabeuddin SyedDepartment of Biological Sciences & Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN, 46556, USA. zainulabeuddin.syed.5@nd.edu.ORCID 0000-0002-6235-7115
University of Notre Dame · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDrosophila suzukii differs from other melanogaster group members in their proclivity for laying eggs in fresh fruit rather than in fermenting fruits. Olfaction and gustation play a critical role during insect niche formation, and these senses are largely mediated by two important receptor families: olfactory and gustatory receptors (Ors and Grs). Earlier work from our laboratory has revealed how the olfactory landscape of D. suzukii is dominated by volatiles derived from its unique niche. Signaling and reception evolve in synchrony, since the interaction of ligands and receptors together mediate the chemosensory behavior. Here, we manually annotated the Ors and Grs in D. suzukii and two close relatives, D. biarmipes and D. takahashii, and compared these repertoires to those in other melanogaster group drosophilids to identify candidate chemoreceptors associated with D. suzukii's unusual niche utilization.

resultsOur comprehensive annotations of the chemosensory genomes in three species, and comparative analysis with other melanogaster group members provide insights into the evolution of chemosensation in the pestiferous D. suzukii. We annotated a total of 71 Or genes in D. suzukii, with nine of those being pseudogenes (12.7 %). Alternative splicing of two genes brings the total to 62 genes encoding 66 Ors. Duplications of Or23a and Or67a expanded D. suzukii's Or repertoire, while pseudogenization of Or74a, Or85a, and Or98b reduced the number of functional Ors to roughly the same as other annotated species in the melanogaster group. Seventy-one intact Gr genes and three pseudogenes were annotated in D. suzukii. Alternative splicing in three genes brings the total number of Grs to 81. We identified signatures of positive selection in two Ors and three Grs at nodes leading to D. suzukii, while three copies in the largest expanded Or lineage, Or67a, also showed signs of positive selection at the external nodes.

conclusionOur analysis of D. suzukii's chemoreceptor repertoires in the context of nine melanogaster group drosophilids, including two of its closest relatives (D. biarmipes and D. takahashii), revealed several candidate receptors associated with the adaptation of D. suzukii to its unique ecological niche.

Indexed as

Evolution, MolecularMultigene FamilyAnimalsBiological EvolutionDrosophilaDrosophila ProteinsPhylogenyReceptors, Cell SurfaceReceptors, OdorantSelection, GeneticSensory Receptor CellsSpecies SpecificityDrosophila Proteinsgustatory receptor, DrosophilaReceptors, Cell SurfaceReceptors, OdorantAdaptionEpisodic selectionGustationGustatory receptorsMolecular evolutionNiche utilizationOdorant receptorsOlfaction

Identifiers

PMID27530109
PMCPMC4988008
OpenAlexW2516899130

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.