Evidence map›Paper›PMID 27529643›Full record

ArticleAmerican journal of respiratory cell and molecular biology2017

Mechanical Stress and Single Nucleotide Variants Regulate Alternative Splicing of the MYLK Gene.

Joseph B Mascarenhas, Alex Y Tchourbanov, Hanli Fan, Sergei M Danilov, Ting Wang, Joe G N Garcia

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 25 citations in OpenAlex.

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  15. Article
  16. The Splicing Factor hnRNPA1 Regulates Alternate Splicing of the MYLK Gene.American journal of respiratory cell and molecular biology · 2018
    Article
  17. Splice Wars: The Role of MLCK Isoforms in Ventilation-induced Lung Injury.American journal of respiratory cell and molecular biology · 2018
    Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Joseph B Mascarenhas1 Department of Medicine, and.
Alex Y Tchourbanov2 Arizona Research Laboratory, University of Arizona, Tucson, Arizona; and.
Hanli Fan3 Department of Anesthesiology, University of Illinois at Chicago, Chicago, Illinois.
Sergei M Danilov1 Department of Medicine, and.
Ting Wang1 Department of Medicine, and.
Joe G N Garcia1 Department of Medicine, and.
University Of Medicine 1 Yangon · MMUniversity of Illinois Chicago · USUniversity of Arizona · US

Funding

Tissue Culture Biomechanical CoreP01HL058064 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LAL, RATNESHWAR · 1998 to 2012
$27.8M
Structure-Function Analysis of nmMLCK in EC Barrier ResponsesP01HL126609 · NHLBI · UNIVERSITY OF FLORIDA · PI STEVEN M DUDEK · 2016 to 2026
$24.4M
Regulation of Asthmatic Inflammation by Non-Muscle MLCKR01HL091889 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI GARCIA, JOE G. N., WANG, TING · 2008 to 2018
$3.2M
NHLBI NIH HHS P01 HL058064NHLBI NIH HHS P01 HL126609NHLBI NIH HHS R01 HL091889
6 · The paper itself

Abstract

The nonmuscle (nm) myosin light-chain kinase isoform (MLCK), encoded by the MYLK gene, is a vital participant in regulating vascular barrier responses to mechanical and inflammatory stimuli. We determined that MYLK is alternatively spliced, yielding functionally distinct nmMLCK splice variants including nmMLCK2, a splice variant highly expressed in vascular endothelial cells (EC) and associated with reduced EC barrier integrity. We demonstrated previously that the nmMLCK2 variant lacks exon 11, which encodes a key regulatory region containing two differentially phosphorylated tyrosine residues (Y

Indexed as

Stress, MechanicalAlternative SplicingBase SequenceComputational BiologyComputer SimulationConsensus SequenceExonsHEK293 CellsHumansLymphocytesMyosin-Light-Chain KinasePolymorphism, Single NucleotideReproducibility of ResultsRNA Splice SitesMyosin-Light-Chain KinaseRNA Splice Sitesbioinformaticscyclic stretchsingle nucleotide polymorphismsplicingventilator-induced lung injury

Identifiers

PMID27529643
PMCPMC5248959
OpenAlexW2510490007

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.