Evidence map›Paper›PMID 27528508›Full record

ArticleJournal of bacteriology2016

Depletion of Undecaprenyl Pyrophosphate Phosphatases Disrupts Cell Envelope Biogenesis in Bacillus subtilis.

Heng Zhao, Yingjie Sun, Jason M Peters, Carol A Gross, Ethan C Garner, John D Helmann

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 71 citations in OpenAlex.

  1. Menaquinone biosynthesis inEngineering microbiology · 2026
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  8. The extracytoplasmic sigma factor σScientific reports · 2025
    Article
  9. PgpP is a broadly conserved phosphatase required for phosphatidylglycerol lipid synthesis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Article
  11. Functional loss ofFrontiers in microbiology · 2025
    Article
  12. Article
  13. Review
  14. Review
  15. Mobile-CRISPRi as a powerful tool for modulatingApplied and environmental microbiology · 2024
    Article
  16. Article
  17. TheJournal of bacteriology · 2024
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Heng ZhaoCornell University, Department of Microbiology, Ithaca, New York, USA.
Yingjie SunMolecular and Cellular Biology Department and Faculty of Arts and Sciences (FAS) Center for Systems Biology, Harvard University, Cambridge, Massachusetts, USA.
Jason M PetersDepartment of Microbiology and Immunology, University of California, San Francisco, California, USA.
Carol A GrossDepartment of Microbiology and Immunology, University of California, San Francisco, California, USA.
Ethan C GarnerMolecular and Cellular Biology Department and Faculty of Arts and Sciences (FAS) Center for Systems Biology, Harvard University, Cambridge, Massachusetts, USA.
John D HelmannCornell University, Department of Microbiology, Ithaca, New York, USA jdh9@cornell.edu.
Cornell University · USHarvard University · USUniversity of California, San Francisco · US

Funding

Cellular homeostasis pathways in bacteriaR35GM118061 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GROSS, CAROL ANNE · 2016 to 2025
$9.0M
STRUCTURAL STUDIES OF BACILLUS SUBTILIS SIGMA FACTORSR01GM047446 · NIGMS · CORNELL UNIVERSITY ITHACA · PI HELMANN, JOHN D · 1992 to 2016
$6.7M
Dissecting bacterial cell wall synthesis using in vivo single molecule trackingDP2AI117923 · NIAID · HARVARD UNIVERSITY · PI GARNER, ETHAN CLARK · 2014 to 2014
$2.3M
NIAID NIH HHS DP2 AI117923NIGMS NIH HHS R01 GM047446NIGMS NIH HHS R35 GM118061
6 · The paper itself

Abstract

The integrity of the bacterial cell envelope is essential to sustain life by countering the high turgor pressure of the cell and providing a barrier against chemical insults. In Bacillus subtilis, synthesis of both peptidoglycan and wall teichoic acids requires a common C IMPORTANCE: The emergence of antibiotic resistance among bacterial pathogens is of critical concern and motivates efforts to develop new therapeutics and increase the utility of those already in use. The lipid II cycle is one of the most frequently targeted processes for antibiotics and has been intensively studied. Despite these efforts, some steps have remained poorly defined, partly due to genetic redundancy. CRISPRi provides a powerful tool to investigate the functions of essential genes and sets of genes. Here, we used an optimized CRISPRi system to demonstrate functional redundancy of two UPP phosphatases that are required for the conversion of the initially synthesized UPP lipid carrier to Und-P, the substrate for the synthesis of the initial lipid-linked precursors in peptidoglycan and wall teichoic acid synthesis.

Indexed as

Bacillus subtilisBacterial ProteinsCell WallGene DeletionGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicPolyisoprenyl PhosphatesPyrophosphatasesBacterial ProteinsPolyisoprenyl PhosphatesPyrophosphatasesundecaprenyl pyrophosphateundecaprenyl pyrophosphate phosphatase

Identifiers

PMID27528508
PMCPMC5055597
OpenAlexW2510949064

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.