Evidence map›Paper›PMID 27528092›Full record

ArticleScientific reports2016

Epigenetic silencing of the NR4A3 tumor suppressor, by aberrant JAK/STAT signaling, predicts prognosis in gastric cancer.

Chung-Min Yeh, Liang-Yu Chang, Shu-Hui Lin, Jian-Liang Chou, Hsiao-Yen Hsieh, Li-Han Zeng, Sheng-Yu Chuang, Hsiao-Wen Wang, Claudia Dittner, Cheng-Yu Lin and 8 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 48 citations in OpenAlex.

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  15. Journal of dental research · 2021
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  16. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 4 countries.

Chung-Min YehDepartment of Surgical Pathology, Changhua Christian Hospital, Changhua, Taiwan.
Liang-Yu ChangDepartment of Life Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
Shu-Hui LinDepartment of Surgical Pathology, Changhua Christian Hospital, Changhua, Taiwan.
Jian-Liang ChouDepartment of Life Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
Hsiao-Yen HsiehDepartment of Life Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
Li-Han ZengDepartment of Life Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
Sheng-Yu ChuangDepartment of Computer Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
Hsiao-Wen WangDepartment of Computer Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
Claudia DittnerDepartment of Life Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
Cheng-Yu LinDepartment of Surgical Pathology, Changhua Christian Hospital, Changhua, Taiwan.
Jora M J LinDepartment of Life Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
Yao-Ting HuangDepartment of Computer Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
Enders K W NgDepartment of Surgery, The Chinese University of Hong Kong, Hong Kong SAR, China.
Alfred S L ChengSchool of Biomedical Sciences, The Chinese University of Hong Kong, Hong Kong SAR, China.
Shu-Fen WuDepartment of Life Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
Jiayuh LinDepartment of Pediatrics, The Ohio State University, Columbus, OH, USA.
Kun-Tu YehDepartment of Surgical Pathology, Changhua Christian Hospital, Changhua, Taiwan.
Michael W Y ChanDepartment of Life Science, National Chung Cheng University, Min-Hsiung, Chia-Yi, Taiwan.
National Chung Cheng University · TWChanghua Christian Hospital · TWChinese University of Hong Kong · CNChia-Yi Christian Hospital · TWChung Shan Medical University · TWDKFZ-ZMBH Alliance · DEKang-Ning Junior College of Medical Care and Management · TWThe Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

While aberrant JAK/STAT signaling is crucial to the development of gastric cancer (GC), its effects on epigenetic alterations of its transcriptional targets remains unclear. In this study, by expression microarrays coupled with bioinformatic analyses, we identified a putative STAT3 target gene, NR4A3 that was downregulated in MKN28 GC daughter cells overexpressing a constitutively activated STAT3 mutant (S16), as compared to an empty vector control (C9). Bisulphite pyrosequencing and demethylation treatment showed that NR4A3 was epigenetically silenced by promoter DNA methylation in S16 and other GC cell lines including AGS cells, showing constitutive activation of STAT3. Subsequent experiments revealed that NR4A3 promoter binding by STAT3 might repress its transcription. Long-term depletion of STAT3 derepressed NR4A3 expression, by promoter demethylation, in AGS GC cells. NR4A3 re-expression in GC cell lines sensitized the cells to cisplatin, and inhibited tumor growth in vitro and in vivo, in an animal model. Clinically, GC patients with high NR4A3 methylation, or lower NR4A3 protein expression, had significantly shorter overall survival. Intriguingly, STAT3 activation significantly associated only with NR4A3 methylation in low-stage patient samples. Taken together, aberrant JAK/STAT3 signaling epigenetically silences a potential tumor suppressor, NR4A3, in gastric cancer, plausibly representing a reliable biomarker for gastric cancer prognosis.

Indexed as

Epigenesis, GeneticGene SilencingSignal TransductionCell Line, TumorDNA-Binding ProteinsDNA MethylationHumansJanus KinasesPrognosisPromoter Regions, GeneticReceptors, SteroidReceptors, Thyroid HormoneSTAT3 Transcription FactorStomach NeoplasmsDNA-Binding ProteinsJanus KinasesNR4A3 protein, humanReceptors, SteroidReceptors, Thyroid HormoneSTAT3 Transcription Factor

Identifiers

PMID27528092
PMCPMC4985659
OpenAlexW2518248979

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.