Evidence map›Paper›PMID 27527721›Full record

ArticleCell stress & chaperones2016

Molecular characterization and expression analysis of Hsp90 in Schizothorax prenanti.

Yundan Pu, Jieyao Zhu, Hong Wang, Xin Zhang, Jin Hao, Yuanbin Wu, Yi Geng, Kaiyu Wang, Zhiqiong Li, Jian Zhou and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell stress & chaperones, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 18 citations in OpenAlex.

  1. Comprehensive transcriptomics and proteomics analysis ofFish and shellfish immunology reports · 2023
    Article
  2. Article
  3. Animals : an open access journal from MDPI · 2022
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Yundan PuDepartment of Aquaculture, College of Animal Science and Technology, Sichuan Agricultural University, WenJiang District Huimin Road No. 211, ChengDu, Sichuan Province, 611130, China.
Jieyao ZhuDepartment of Aquaculture, College of Animal Science and Technology, Sichuan Agricultural University, WenJiang District Huimin Road No. 211, ChengDu, Sichuan Province, 611130, China.
Hong WangDepartment of Aquaculture, College of Animal Science and Technology, Sichuan Agricultural University, WenJiang District Huimin Road No. 211, ChengDu, Sichuan Province, 611130, China.
Xin ZhangDepartment of Aquaculture, College of Animal Science and Technology, Sichuan Agricultural University, WenJiang District Huimin Road No. 211, ChengDu, Sichuan Province, 611130, China.
Jin HaoDepartment of Aquaculture, College of Animal Science and Technology, Sichuan Agricultural University, WenJiang District Huimin Road No. 211, ChengDu, Sichuan Province, 611130, China.
Yuanbin WuDepartment of Aquaculture, College of Animal Science and Technology, Sichuan Agricultural University, WenJiang District Huimin Road No. 211, ChengDu, Sichuan Province, 611130, China.
Yi GengCollege of Veterinary Medicine, Sichuan Agricultural University, WenJiang District Huimin Road No. 211, ChengDu, Sichuan Province, 611130, China.
Kaiyu WangCollege of Veterinary Medicine, Sichuan Agricultural University, WenJiang District Huimin Road No. 211, ChengDu, Sichuan Province, 611130, China.
Zhiqiong LiDepartment of Aquaculture, College of Animal Science and Technology, Sichuan Agricultural University, WenJiang District Huimin Road No. 211, ChengDu, Sichuan Province, 611130, China.
Jian ZhouFisheries Research Institute, Sichuan Academy of Agricultural Sciences, ChengDu, China. zhoujian980@126.com.
Defang ChenDepartment of Aquaculture, College of Animal Science and Technology, Sichuan Agricultural University, WenJiang District Huimin Road No. 211, ChengDu, Sichuan Province, 611130, China. chendf_sicau@126.com.
Sichuan Agricultural University · CNSichuan Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aquatic animals suffer from various environmental stresses because the aquatic environment is a very complex system. To monitor the health status of fish, Hsp90 a potential early warning marker was determined in Schizothorax prenanti after infection with a bacterium. In this study, we cloned Hsp90 from S. prenanti for the first time. The full-length cDNA sequence of SpHsp90 was 2663 bp, contains an open reading frame of 2181 bp, and has a gene encoding 726 amino acids, an estimated molecular mass of 83.38 kDa, and a theoretical isoelectric point of 4.91. The SpHsp90 amino acid sequence has five conserved HSP90 family signatures and shares 87.0-95.5 % identity with other vertebrates. Phylogenetic analysis and structure comparison indicated that SpHsp90 should be a β isoform of the HSP90 family. SpHsp90 was ubiquitously expressed in all examined tissues, and the highest level of expression was in the kidney. After Streptococcus agalactiae infection, the level of SpHsp90 expression had significant changes (P < 0.05) in the hepatopancreas, spleen, kidney, and blood. The expression increased to the highest level at 6 h in the blood and at 24 h in the hepatopancreas, spleen, and kidney. The results suggested that the SpHsp90 gene could be induced by S. agalactiae in S. prenanti and that SpHsp90 may be involved in resistance to bacterial infection and provide an early warning information. The kidney is the most suitable for detecting SpHsp90 after bacterial infection.

Indexed as

Amino Acid SequenceAnimalsCloning, MolecularCyprinidaeDNA, ComplementaryFish ProteinsHSP90 Heat-Shock ProteinsIsoelectric PointMolecular WeightPhylogenyRNASequence AlignmentSequence Analysis, DNATranscriptomeDNA, ComplementaryFish ProteinsHSP90 Heat-Shock ProteinsRNABacterial infectionGene expressionHsp90Molecular characterizationSchizothorax prenanti

Identifiers

PMID27527721
PMCPMC5083668
OpenAlexW2510314119

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.