Evidence map›Paper›PMID 27527085›Full record

ArticleAntimicrobial agents and chemotherapy2016

Characterization of DprE1-Mediated Benzothiazinone Resistance in Mycobacterium tuberculosis.

Caroline Shi-Yan Foo, Benoit Lechartier, Gaëlle S Kolly, Stefanie Boy-Röttger, João Neres, Jan Rybniker, Andréanne Lupien, Claudia Sala, Jérémie Piton, Stewart T Cole

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  5. Review
  6. Review
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  10. Article
  11. The Regulation of ManLAM-Related Gene Expression inInfection and drug resistance · 2022
    Article
  12. Review
  13. 8-cyanobenzothiazinone analogs with potent antitubercular activity.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents · 2021
    Article
  14. Polarly Localized EccEJournal of bacteriology · 2020
    Article
  15. Article
  16. Antimicrobial agents and chemotherapy · 2018
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 3 countries.

Caroline Shi-Yan FooGlobal Health Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Benoit LechartierGlobal Health Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Gaëlle S KollyGlobal Health Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Stefanie Boy-RöttgerGlobal Health Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
João NeresGlobal Health Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Jan RybnikerGlobal Health Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Andréanne LupienGlobal Health Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Claudia SalaGlobal Health Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Jérémie PitonGlobal Health Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
Stewart T ColeGlobal Health Institute, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland stewart.cole@epfl.ch.
École Polytechnique Fédérale de Lausanne · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Benzothiazinones (BTZs) are a class of compounds found to be extremely potent against both drug-susceptible and drug-resistant Mycobacterium tuberculosis strains. The potency of BTZs is explained by their specificity for their target decaprenylphosphoryl-d-ribose oxidase (DprE1), in particular by covalent binding of the activated form of the compound to the critical cysteine 387 residue of the enzyme. To probe the role of C387, we used promiscuous site-directed mutagenesis to introduce other codons at this position into dprE1 of M. tuberculosis The resultant viable BTZ-resistant mutants were characterized in vitro, ex vivo, and biochemically to gain insight into the effects of these mutations on DprE1 function and on M. tuberculosis Five different mutations (C387G, C387A, C387S, C387N, and C387T) conferred various levels of resistance to BTZ and exhibited different phenotypes. The C387G and C387N mutations resulted in a lower growth rate of the mycobacterium on solid medium, which could be attributed to the significant decrease in the catalytic efficiency of the DprE1 enzyme. All five mutations rendered the mycobacterium less cytotoxic to macrophages. Finally, differences in the potencies of covalent and noncovalent DprE1 inhibitors in the presence of C387 mutations were revealed by enzymatic assays. As expected from the mechanism of action, the covalent inhibitor PBTZ169 only partially inhibited the mutant DprE1 enzymes compared to the near-complete inhibition with a noncovalent DprE1 inhibitor, Ty38c. This study emphasizes the importance of the C387 residue for DprE1 activity and for the killing action of covalent inhibitors such as BTZs and other recently identified nitroaromatic inhibitors.

Indexed as

MutationAlcohol OxidoreductasesAmino Acid SubstitutionAntitubercular AgentsBacterial ProteinsCell LineCysteineDrug Resistance, Multiple, BacterialEnzyme InhibitorsGene ExpressionHumansMacrophagesMolecular Docking SimulationMutagenesis, Site-DirectedMycobacterium smegmatisMycobacterium tuberculosisAlcohol OxidoreductasesAntitubercular AgentsBacterial ProteinsCysteineDprE1 protein, Mycobacterium tuberculosisEnzyme InhibitorsmacozinonePiperazinesThiazines

Identifiers

PMID27527085
PMCPMC5075049
OpenAlexW2511146742

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.