Evidence map›Paper›PMID 27525349›Full record

ArticleThe journal of physical chemistry letters2016

Specific Binding of Cholesterol to C99 Domain of Amyloid Precursor Protein Depends Critically on Charge State of Protein.

Afra Panahi, Asanga Bandara, George A Pantelopulos, Laura Dominguez, John E Straub

Open access · greenAbstract readLetter
In one paragraph

Article in The journal of physical chemistry letters, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Salidroside mitigates cognitive deficits in AlClFrontiers in behavioral neuroscience · 2026
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  3. Review
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  5. Review
  6. Membrane-induced tau amyloid fibrils.Communications biology · 2023
    Article
  7. Review
  8. Article
  9. Formation of extramembraneProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. M2 amphipathic helices facilitate pH-dependent conformational transition in influenza A virus.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Afra PanahiDepartment of Chemistry, Boston University , 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States.
Asanga BandaraDepartment of Chemistry, Boston University , 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States.
George A PantelopulosDepartment of Chemistry, Boston University , 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States.
Laura DominguezBiophysical Chemistry Laboratory, Physical Chemistry Department, School of Chemistry, National Autonomous University of Mexico , Mexico City, Mexico.
John E StraubDepartment of Chemistry, Boston University , 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States.
Boston University · USUniversidad Nacional Autónoma de México · MX

Funding

Probing the roles of membrane and cholesterol on Aβ biogenesis and prion protein interactionsR01GM107703 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI STRAUB, JOHN E., THIRUMALAI, DEVARAJAN · 2015 to 2022
$2.7M
NIGMS NIH HHS R01 GM107703
6 · The paper itself

Abstract

Recent NMR chemical shift measurements of the 99 residue C-terminal fragment of amyloid precursor protein (APP-C99) in the presence of cholesterol provide evidence of binary complex formation between C99 and cholesterol in membrane mimetic environments. It has also been observed that the production of Aβ protein is enhanced under conditions of high cholesterol concentration. In this study, we investigated the impact of the charge state of C99 on the structure and stability of the C99-cholesterol complex. We observed that the binding of C99 to cholesterol depends critically on the charge state of Glu 693 (E22) and Asp 694 (D23). Evaluation of the pKa values of the Asp and Glu side chains suggests that these residues may be predominantly neutral in existing experimental observations of a stable C99-cholesterol complex at lower pH (characteristic of the endosomal environment), while binding is destabilized near neutral pH (characteristic of the cytoplasm). These observations suggest that specific binding of cholesterol to C99 is a sensitive function of the pH encountered in vivo, with key E22 and D23 residues serving as a "pH switch" controlling C99-cholesterol binding.

Indexed as

Amyloid beta-Protein PrecursorCholesterolHumansLipid BilayersProtein BindingProteinsAmyloid beta-Protein PrecursorCholesterolLipid BilayersProteins

Identifiers

PMID27525349
PMCPMC5293176
OpenAlexW2514856898

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.